Protein–RNA interactions for Protein: Q3UU96

Cdc42bpa, Serine/threonine-protein kinase MRCK alpha, mousemouse

Predictions only

Length 1,719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc42bpaQ3UU96 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdc42bpaQ3UU96 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC18.27■□□□□ 0.52
Cdc42bpaQ3UU96 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cdc42bpaQ3UU96 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cdc42bpaQ3UU96 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cdc42bpaQ3UU96 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC18.27■□□□□ 0.51
Cdc42bpaQ3UU96 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.51
Cdc42bpaQ3UU96 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdc42bpaQ3UU96 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdc42bpaQ3UU96 Gm15744-201ENSMUST00000161734 213 ntBASIC18.26■□□□□ 0.51
Cdc42bpaQ3UU96 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC18.26■□□□□ 0.51
Cdc42bpaQ3UU96 Gm18041-201ENSMUST00000218210 618 ntBASIC18.26■□□□□ 0.51
Cdc42bpaQ3UU96 AC165260.2-203ENSMUST00000224237 336 ntBASIC18.26■□□□□ 0.51
Cdc42bpaQ3UU96 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdc42bpaQ3UU96 Gm45266-201ENSMUST00000210111 2173 ntBASIC18.26■□□□□ 0.51
Cdc42bpaQ3UU96 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdc42bpaQ3UU96 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Cdc42bpaQ3UU96 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Cdc42bpaQ3UU96 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdc42bpaQ3UU96 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdc42bpaQ3UU96 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdc42bpaQ3UU96 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdc42bpaQ3UU96 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdc42bpaQ3UU96 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC18.26■□□□□ 0.51
Cdc42bpaQ3UU96 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cdc42bpaQ3UU96 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cdc42bpaQ3UU96 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC18.26■□□□□ 0.51
Cdc42bpaQ3UU96 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cdc42bpaQ3UU96 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdc42bpaQ3UU96 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdc42bpaQ3UU96 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdc42bpaQ3UU96 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC18.26■□□□□ 0.51
Cdc42bpaQ3UU96 Gm23912-201ENSMUST00000104687 87 ntBASIC18.26■□□□□ 0.51
Cdc42bpaQ3UU96 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC18.26■□□□□ 0.51
Cdc42bpaQ3UU96 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cdc42bpaQ3UU96 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cdc42bpaQ3UU96 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC18.26■□□□□ 0.51
Cdc42bpaQ3UU96 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cdc42bpaQ3UU96 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cdc42bpaQ3UU96 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cdc42bpaQ3UU96 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdc42bpaQ3UU96 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdc42bpaQ3UU96 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cdc42bpaQ3UU96 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdc42bpaQ3UU96 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdc42bpaQ3UU96 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdc42bpaQ3UU96 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cdc42bpaQ3UU96 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdc42bpaQ3UU96 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdc42bpaQ3UU96 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdc42bpaQ3UU96 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cdc42bpaQ3UU96 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cdc42bpaQ3UU96 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cdc42bpaQ3UU96 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cdc42bpaQ3UU96 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
Cdc42bpaQ3UU96 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdc42bpaQ3UU96 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdc42bpaQ3UU96 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdc42bpaQ3UU96 Gm37513-201ENSMUST00000194830 2268 ntBASIC18.25■□□□□ 0.51
Cdc42bpaQ3UU96 Gm38378-201ENSMUST00000195153 2268 ntBASIC18.25■□□□□ 0.51
Cdc42bpaQ3UU96 AC241621.2-201ENSMUST00000223991 2151 ntBASIC18.25■□□□□ 0.51
Cdc42bpaQ3UU96 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Cdc42bpaQ3UU96 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdc42bpaQ3UU96 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC18.25■□□□□ 0.51
Cdc42bpaQ3UU96 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC18.25■□□□□ 0.51
Cdc42bpaQ3UU96 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC18.25■□□□□ 0.51
Cdc42bpaQ3UU96 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Cdc42bpaQ3UU96 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cdc42bpaQ3UU96 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdc42bpaQ3UU96 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdc42bpaQ3UU96 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdc42bpaQ3UU96 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Cdc42bpaQ3UU96 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cdc42bpaQ3UU96 Gm6903-201ENSMUST00000160509 1366 ntBASIC18.24■□□□□ 0.51
Cdc42bpaQ3UU96 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdc42bpaQ3UU96 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC18.24■□□□□ 0.51
Cdc42bpaQ3UU96 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdc42bpaQ3UU96 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cdc42bpaQ3UU96 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Cdc42bpaQ3UU96 Mir6998-201ENSMUST00000183343 64 ntBASIC18.24■□□□□ 0.51
Cdc42bpaQ3UU96 AC174797.2-202ENSMUST00000225729 568 ntBASIC18.24■□□□□ 0.51
Cdc42bpaQ3UU96 Gm5879-201ENSMUST00000089501 1209 ntBASIC18.24■□□□□ 0.51
Cdc42bpaQ3UU96 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdc42bpaQ3UU96 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Cdc42bpaQ3UU96 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Cdc42bpaQ3UU96 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Cdc42bpaQ3UU96 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdc42bpaQ3UU96 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdc42bpaQ3UU96 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdc42bpaQ3UU96 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdc42bpaQ3UU96 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cdc42bpaQ3UU96 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdc42bpaQ3UU96 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
Cdc42bpaQ3UU96 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cdc42bpaQ3UU96 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdc42bpaQ3UU96 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdc42bpaQ3UU96 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdc42bpaQ3UU96 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdc42bpaQ3UU96 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Cdc42bpaQ3UU96 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms