Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Arhgef40Q3UPH7 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC18.31■□□□□ 0.52
Arhgef40Q3UPH7 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Arhgef40Q3UPH7 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC18.31■□□□□ 0.52
Arhgef40Q3UPH7 Gm3671-201ENSMUST00000182463 1007 ntBASIC18.31■□□□□ 0.52
Arhgef40Q3UPH7 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Arhgef40Q3UPH7 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Arhgef40Q3UPH7 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC18.31■□□□□ 0.52
Arhgef40Q3UPH7 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Arhgef40Q3UPH7 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Arhgef40Q3UPH7 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC18.31■□□□□ 0.52
Arhgef40Q3UPH7 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC18.31■□□□□ 0.52
Arhgef40Q3UPH7 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Arhgef40Q3UPH7 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Arhgef40Q3UPH7 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Arhgef40Q3UPH7 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Arhgef40Q3UPH7 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Arhgef40Q3UPH7 Gm45643-201ENSMUST00000211364 1484 ntBASIC18.31■□□□□ 0.52
Arhgef40Q3UPH7 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Arhgef40Q3UPH7 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Arhgef40Q3UPH7 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Arhgef40Q3UPH7 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
Arhgef40Q3UPH7 Gm43677-201ENSMUST00000198098 2378 ntBASIC18.3■□□□□ 0.52
Arhgef40Q3UPH7 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Arhgef40Q3UPH7 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
Arhgef40Q3UPH7 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Arhgef40Q3UPH7 AC126262.1-201ENSMUST00000221802 1904 ntBASIC18.3■□□□□ 0.52
Arhgef40Q3UPH7 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC18.3■□□□□ 0.52
Arhgef40Q3UPH7 Gm25880-201ENSMUST00000104331 132 ntBASIC18.3■□□□□ 0.52
Arhgef40Q3UPH7 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Arhgef40Q3UPH7 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Arhgef40Q3UPH7 Gm12579-201ENSMUST00000118040 783 ntBASIC18.3■□□□□ 0.52
Arhgef40Q3UPH7 Gm16166-201ENSMUST00000118291 787 ntBASIC18.3■□□□□ 0.52
Arhgef40Q3UPH7 Gm5419-201ENSMUST00000119301 527 ntBASIC18.3■□□□□ 0.52
Arhgef40Q3UPH7 Gm22138-201ENSMUST00000158748 128 ntBASIC18.3■□□□□ 0.52
Arhgef40Q3UPH7 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
Arhgef40Q3UPH7 Gm2965-201ENSMUST00000198365 343 ntBASIC18.3■□□□□ 0.52
Arhgef40Q3UPH7 Gm9797-202ENSMUST00000218003 294 ntBASIC18.3■□□□□ 0.52
Arhgef40Q3UPH7 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Arhgef40Q3UPH7 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Arhgef40Q3UPH7 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Arhgef40Q3UPH7 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Arhgef40Q3UPH7 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC18.3■□□□□ 0.52
Arhgef40Q3UPH7 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Arhgef40Q3UPH7 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC18.3■□□□□ 0.52
Arhgef40Q3UPH7 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC18.3■□□□□ 0.52
Arhgef40Q3UPH7 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Arhgef40Q3UPH7 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Arhgef40Q3UPH7 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Arhgef40Q3UPH7 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Arhgef40Q3UPH7 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Arhgef40Q3UPH7 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Arhgef40Q3UPH7 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Arhgef40Q3UPH7 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Arhgef40Q3UPH7 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Arhgef40Q3UPH7 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
Arhgef40Q3UPH7 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Arhgef40Q3UPH7 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Arhgef40Q3UPH7 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Arhgef40Q3UPH7 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC18.29■□□□□ 0.52
Arhgef40Q3UPH7 AC153505.1-201ENSMUST00000218819 1071 ntBASIC18.29■□□□□ 0.52
Arhgef40Q3UPH7 AC174797.2-202ENSMUST00000225729 568 ntBASIC18.29■□□□□ 0.52
Arhgef40Q3UPH7 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Arhgef40Q3UPH7 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC18.29■□□□□ 0.52
Arhgef40Q3UPH7 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Arhgef40Q3UPH7 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Arhgef40Q3UPH7 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Arhgef40Q3UPH7 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Arhgef40Q3UPH7 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Arhgef40Q3UPH7 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Arhgef40Q3UPH7 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Arhgef40Q3UPH7 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC18.29■□□□□ 0.52
Arhgef40Q3UPH7 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Arhgef40Q3UPH7 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Arhgef40Q3UPH7 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
Arhgef40Q3UPH7 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC18.29■□□□□ 0.52
Arhgef40Q3UPH7 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Arhgef40Q3UPH7 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Arhgef40Q3UPH7 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Arhgef40Q3UPH7 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC18.28■□□□□ 0.52
Arhgef40Q3UPH7 Gm22144-201ENSMUST00000157402 102 ntBASIC18.28■□□□□ 0.52
Arhgef40Q3UPH7 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Arhgef40Q3UPH7 Mir8115-201ENSMUST00000184992 119 ntBASIC18.28■□□□□ 0.52
Arhgef40Q3UPH7 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC18.28■□□□□ 0.52
Arhgef40Q3UPH7 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC18.28■□□□□ 0.52
Arhgef40Q3UPH7 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Arhgef40Q3UPH7 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Arhgef40Q3UPH7 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Arhgef40Q3UPH7 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Arhgef40Q3UPH7 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Arhgef40Q3UPH7 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Arhgef40Q3UPH7 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Arhgef40Q3UPH7 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Arhgef40Q3UPH7 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Arhgef40Q3UPH7 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Arhgef40Q3UPH7 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Arhgef40Q3UPH7 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Arhgef40Q3UPH7 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Arhgef40Q3UPH7 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Arhgef40Q3UPH7 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms