Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.25□□□□□ -0.45
Ptchd3Q0EEE2 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ptchd3Q0EEE2 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ptchd3Q0EEE2 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.25□□□□□ -0.45
Ptchd3Q0EEE2 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.25□□□□□ -0.45
Ptchd3Q0EEE2 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.25□□□□□ -0.45
Ptchd3Q0EEE2 Gm15823-201ENSMUST00000064305 670 ntBASIC12.25□□□□□ -0.45
Ptchd3Q0EEE2 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ptchd3Q0EEE2 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ptchd3Q0EEE2 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ptchd3Q0EEE2 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ptchd3Q0EEE2 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ptchd3Q0EEE2 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ptchd3Q0EEE2 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ptchd3Q0EEE2 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Ptchd3Q0EEE2 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ptchd3Q0EEE2 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ptchd3Q0EEE2 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ptchd3Q0EEE2 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.25□□□□□ -0.45
Ptchd3Q0EEE2 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ptchd3Q0EEE2 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ptchd3Q0EEE2 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ptchd3Q0EEE2 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ptchd3Q0EEE2 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 Mir7654-201ENSMUST00000185082 70 ntBASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ptchd3Q0EEE2 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ptchd3Q0EEE2 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.23□□□□□ -0.45
Ptchd3Q0EEE2 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ptchd3Q0EEE2 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ptchd3Q0EEE2 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Ptchd3Q0EEE2 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ptchd3Q0EEE2 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ptchd3Q0EEE2 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ptchd3Q0EEE2 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ptchd3Q0EEE2 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.23□□□□□ -0.45
Ptchd3Q0EEE2 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ptchd3Q0EEE2 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ptchd3Q0EEE2 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Ptchd3Q0EEE2 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ptchd3Q0EEE2 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ptchd3Q0EEE2 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ptchd3Q0EEE2 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ptchd3Q0EEE2 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Ptchd3Q0EEE2 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ptchd3Q0EEE2 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ptchd3Q0EEE2 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ptchd3Q0EEE2 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ptchd3Q0EEE2 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.23□□□□□ -0.45
Ptchd3Q0EEE2 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Ptchd3Q0EEE2 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms