Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc4Q08624 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc4Q08624 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Hoxc4Q08624 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Hoxc4Q08624 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc4Q08624 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc4Q08624 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.17□□□□□ -0.46
Hoxc4Q08624 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc4Q08624 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc4Q08624 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc4Q08624 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc4Q08624 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Hoxc4Q08624 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.17□□□□□ -0.46
Hoxc4Q08624 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.17□□□□□ -0.46
Hoxc4Q08624 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc4Q08624 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc4Q08624 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Hoxc4Q08624 Gm13996-201ENSMUST00000118456 430 ntBASIC12.17□□□□□ -0.46
Hoxc4Q08624 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc4Q08624 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.17□□□□□ -0.46
Hoxc4Q08624 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc4Q08624 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.17□□□□□ -0.46
Hoxc4Q08624 Gm5070-201ENSMUST00000177599 862 ntBASIC12.17□□□□□ -0.46
Hoxc4Q08624 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.17□□□□□ -0.46
Hoxc4Q08624 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc4Q08624 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.17□□□□□ -0.46
Hoxc4Q08624 Gm19187-201ENSMUST00000206781 892 ntBASIC12.17□□□□□ -0.46
Hoxc4Q08624 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.17□□□□□ -0.46
Hoxc4Q08624 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.17□□□□□ -0.46
Hoxc4Q08624 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc4Q08624 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.17□□□□□ -0.46
Hoxc4Q08624 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc4Q08624 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc4Q08624 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc4Q08624 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.17□□□□□ -0.46
Hoxc4Q08624 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc4Q08624 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc4Q08624 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc4Q08624 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.17□□□□□ -0.46
Hoxc4Q08624 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.17□□□□□ -0.46
Hoxc4Q08624 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.17□□□□□ -0.46
Hoxc4Q08624 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc4Q08624 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc4Q08624 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc4Q08624 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Hoxc4Q08624 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc4Q08624 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc4Q08624 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc4Q08624 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc4Q08624 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc4Q08624 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc4Q08624 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.17□□□□□ -0.46
Hoxc4Q08624 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc4Q08624 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.17□□□□□ -0.46
Hoxc4Q08624 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc4Q08624 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc4Q08624 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc4Q08624 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc4Q08624 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Hoxc4Q08624 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc4Q08624 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc4Q08624 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.16□□□□□ -0.46
Hoxc4Q08624 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.16□□□□□ -0.46
Hoxc4Q08624 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Hoxc4Q08624 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Hoxc4Q08624 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Hoxc4Q08624 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc4Q08624 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc4Q08624 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Hoxc4Q08624 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc4Q08624 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc4Q08624 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc4Q08624 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.16□□□□□ -0.46
Hoxc4Q08624 Gm13296-201ENSMUST00000117854 997 ntBASIC12.16□□□□□ -0.46
Hoxc4Q08624 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc4Q08624 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.16□□□□□ -0.46
Hoxc4Q08624 Gm16570-201ENSMUST00000161951 436 ntBASIC12.16□□□□□ -0.46
Hoxc4Q08624 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc4Q08624 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.16□□□□□ -0.46
Hoxc4Q08624 Gm32999-201ENSMUST00000192693 562 ntBASIC12.16□□□□□ -0.46
Hoxc4Q08624 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc4Q08624 Gm37466-201ENSMUST00000195692 652 ntBASIC12.16□□□□□ -0.46
Hoxc4Q08624 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc4Q08624 Gm5363-201ENSMUST00000211927 938 ntBASIC12.16□□□□□ -0.46
Hoxc4Q08624 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.16□□□□□ -0.46
Hoxc4Q08624 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.16□□□□□ -0.46
Hoxc4Q08624 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc4Q08624 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Hoxc4Q08624 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc4Q08624 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc4Q08624 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc4Q08624 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Hoxc4Q08624 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc4Q08624 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc4Q08624 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc4Q08624 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc4Q08624 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc4Q08624 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc4Q08624 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc4Q08624 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms