Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col17a1Q07563 Gm4310-201ENSMUST00000177847 889 ntBASIC19.03■□□□□ 0.64
Col17a1Q07563 Gm26272-201ENSMUST00000179241 132 ntBASIC19.03■□□□□ 0.64
Col17a1Q07563 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC19.03■□□□□ 0.64
Col17a1Q07563 Gm9025-201ENSMUST00000122415 1575 ntBASIC19.03■□□□□ 0.64
Col17a1Q07563 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col17a1Q07563 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Col17a1Q07563 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col17a1Q07563 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col17a1Q07563 Gm23132-201ENSMUST00000104254 132 ntBASIC19.03■□□□□ 0.64
Col17a1Q07563 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC19.03■□□□□ 0.64
Col17a1Q07563 Gm12961-201ENSMUST00000120507 1050 ntBASIC19.03■□□□□ 0.64
Col17a1Q07563 Rptoros-201ENSMUST00000127450 1174 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col17a1Q07563 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col17a1Q07563 Gm12248-203ENSMUST00000219877 1160 ntAPPRIS P5 TSL 5 BASIC19.03■□□□□ 0.64
Col17a1Q07563 Gm26670-202ENSMUST00000226862 340 ntBASIC19.03■□□□□ 0.64
Col17a1Q07563 AC121960.1-201ENSMUST00000227982 564 ntBASIC19.03■□□□□ 0.64
Col17a1Q07563 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col17a1Q07563 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col17a1Q07563 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col17a1Q07563 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
Col17a1Q07563 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col17a1Q07563 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Col17a1Q07563 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Col17a1Q07563 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Col17a1Q07563 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col17a1Q07563 Gm45342-201ENSMUST00000210903 1363 ntBASIC19.02■□□□□ 0.64
Col17a1Q07563 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Col17a1Q07563 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Col17a1Q07563 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Col17a1Q07563 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Col17a1Q07563 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Col17a1Q07563 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Col17a1Q07563 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Col17a1Q07563 Mir705-201ENSMUST00000102058 82 ntBASIC19.02■□□□□ 0.63
Col17a1Q07563 Gm23595-201ENSMUST00000104306 130 ntBASIC19.02■□□□□ 0.63
Col17a1Q07563 Gm15746-201ENSMUST00000120684 1027 ntBASIC19.02■□□□□ 0.63
Col17a1Q07563 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Col17a1Q07563 Gm12668-201ENSMUST00000134966 575 ntTSL 3 BASIC19.02■□□□□ 0.63
Col17a1Q07563 Gm6612-201ENSMUST00000170777 395 ntBASIC19.02■□□□□ 0.63
Col17a1Q07563 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Col17a1Q07563 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.63
Col17a1Q07563 Gm45060-201ENSMUST00000203293 593 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Col17a1Q07563 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Col17a1Q07563 Pgk1-rs7-201ENSMUST00000085735 1255 ntBASIC19.02■□□□□ 0.63
Col17a1Q07563 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Col17a1Q07563 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Col17a1Q07563 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Col17a1Q07563 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col17a1Q07563 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col17a1Q07563 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Col17a1Q07563 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col17a1Q07563 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col17a1Q07563 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col17a1Q07563 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col17a1Q07563 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col17a1Q07563 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col17a1Q07563 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col17a1Q07563 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col17a1Q07563 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col17a1Q07563 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col17a1Q07563 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col17a1Q07563 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col17a1Q07563 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Col17a1Q07563 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC19.01■□□□□ 0.63
Col17a1Q07563 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC19.01■□□□□ 0.63
Col17a1Q07563 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Col17a1Q07563 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col17a1Q07563 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col17a1Q07563 AC153152.3-201ENSMUST00000222188 1135 ntBASIC19.01■□□□□ 0.63
Col17a1Q07563 AC158392.3-201ENSMUST00000224271 1284 ntBASIC19.01■□□□□ 0.63
Col17a1Q07563 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col17a1Q07563 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Col17a1Q07563 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Col17a1Q07563 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col17a1Q07563 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC19.01■□□□□ 0.63
Col17a1Q07563 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col17a1Q07563 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col17a1Q07563 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col17a1Q07563 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC19.01■□□□□ 0.63
Col17a1Q07563 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col17a1Q07563 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col17a1Q07563 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col17a1Q07563 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC19■□□□□ 0.63
Col17a1Q07563 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col17a1Q07563 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col17a1Q07563 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col17a1Q07563 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Col17a1Q07563 Shroom3-211ENSMUST00000225438 5742 ntBASIC19■□□□□ 0.63
Col17a1Q07563 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col17a1Q07563 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Col17a1Q07563 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC19■□□□□ 0.63
Col17a1Q07563 4933428M09Rik-201ENSMUST00000113046 1026 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col17a1Q07563 Gm15625-201ENSMUST00000117617 1093 ntBASIC19■□□□□ 0.63
Col17a1Q07563 Gm15207-201ENSMUST00000119259 442 ntBASIC19■□□□□ 0.63
Col17a1Q07563 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC19■□□□□ 0.63
Col17a1Q07563 Eif5a-212ENSMUST00000153652 840 ntTSL 1 (best) BASIC19■□□□□ 0.63
Col17a1Q07563 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col17a1Q07563 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC19■□□□□ 0.63
Col17a1Q07563 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms