Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Cdx4Q07424 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx4Q07424 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Cdx4Q07424 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx4Q07424 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Cdx4Q07424 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC9.83□□□□□ -0.84
Cdx4Q07424 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC9.83□□□□□ -0.84
Cdx4Q07424 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx4Q07424 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC9.83□□□□□ -0.84
Cdx4Q07424 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC9.83□□□□□ -0.84
Cdx4Q07424 Gm37424-201ENSMUST00000191727 561 ntBASIC9.83□□□□□ -0.84
Cdx4Q07424 Gm38319-201ENSMUST00000194537 1266 ntBASIC9.83□□□□□ -0.84
Cdx4Q07424 AC140451.2-201ENSMUST00000228030 664 ntBASIC9.83□□□□□ -0.84
Cdx4Q07424 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC9.83□□□□□ -0.84
Cdx4Q07424 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx4Q07424 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx4Q07424 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx4Q07424 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx4Q07424 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Cdx4Q07424 Gm42480-201ENSMUST00000198434 2595 ntBASIC9.83□□□□□ -0.84
Cdx4Q07424 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Cdx4Q07424 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx4Q07424 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx4Q07424 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx4Q07424 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Cdx4Q07424 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx4Q07424 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC9.83□□□□□ -0.84
Cdx4Q07424 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC9.83□□□□□ -0.84
Cdx4Q07424 Gm37269-201ENSMUST00000193906 1891 ntBASIC9.83□□□□□ -0.84
Cdx4Q07424 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC9.83□□□□□ -0.84
Cdx4Q07424 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC9.83□□□□□ -0.84
Cdx4Q07424 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx4Q07424 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx4Q07424 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx4Q07424 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Cdx4Q07424 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx4Q07424 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx4Q07424 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx4Q07424 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx4Q07424 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC9.82□□□□□ -0.84
Cdx4Q07424 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx4Q07424 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx4Q07424 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC9.82□□□□□ -0.84
Cdx4Q07424 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx4Q07424 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx4Q07424 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx4Q07424 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
Cdx4Q07424 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx4Q07424 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx4Q07424 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC9.82□□□□□ -0.84
Cdx4Q07424 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx4Q07424 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx4Q07424 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx4Q07424 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC9.82□□□□□ -0.84
Cdx4Q07424 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx4Q07424 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx4Q07424 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC9.82□□□□□ -0.84
Cdx4Q07424 Gm12203-201ENSMUST00000118235 598 ntBASIC9.82□□□□□ -0.84
Cdx4Q07424 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC9.82□□□□□ -0.84
Cdx4Q07424 Gm12209-201ENSMUST00000120089 596 ntBASIC9.82□□□□□ -0.84
Cdx4Q07424 Gm10156-201ENSMUST00000122364 462 ntBASIC9.82□□□□□ -0.84
Cdx4Q07424 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Cdx4Q07424 Proscos-202ENSMUST00000178990 666 ntBASIC9.82□□□□□ -0.84
Cdx4Q07424 Gm27572-201ENSMUST00000183702 255 ntBASIC9.82□□□□□ -0.84
Cdx4Q07424 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC9.82□□□□□ -0.84
Cdx4Q07424 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx4Q07424 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC9.82□□□□□ -0.84
Cdx4Q07424 Gm8598-201ENSMUST00000221184 836 ntBASIC9.82□□□□□ -0.84
Cdx4Q07424 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx4Q07424 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx4Q07424 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
Cdx4Q07424 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx4Q07424 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Cdx4Q07424 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx4Q07424 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx4Q07424 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Cdx4Q07424 Gm43061-201ENSMUST00000198850 2241 ntBASIC9.82□□□□□ -0.84
Cdx4Q07424 AC122314.1-201ENSMUST00000223056 2239 ntBASIC9.82□□□□□ -0.84
Cdx4Q07424 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx4Q07424 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC9.82□□□□□ -0.84
Cdx4Q07424 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx4Q07424 Gm6211-201ENSMUST00000147973 4275 ntBASIC9.82□□□□□ -0.84
Cdx4Q07424 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cdx4Q07424 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC9.81□□□□□ -0.84
Cdx4Q07424 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cdx4Q07424 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cdx4Q07424 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cdx4Q07424 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cdx4Q07424 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cdx4Q07424 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Cdx4Q07424 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cdx4Q07424 Gm6447-201ENSMUST00000118905 835 ntBASIC9.81□□□□□ -0.84
Cdx4Q07424 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Cdx4Q07424 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC9.81□□□□□ -0.84
Cdx4Q07424 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC9.81□□□□□ -0.84
Cdx4Q07424 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC9.81□□□□□ -0.84
Cdx4Q07424 Gm27331-201ENSMUST00000183705 60 ntBASIC9.81□□□□□ -0.84
Cdx4Q07424 Gm37922-201ENSMUST00000195596 455 ntBASIC9.81□□□□□ -0.84
Cdx4Q07424 Gm44069-201ENSMUST00000204898 506 ntBASIC9.81□□□□□ -0.84
Cdx4Q07424 Gm44974-201ENSMUST00000206387 1279 ntBASIC9.81□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms