Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.88□□□□□ -0.35
Gabpb1Q00420 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Gabpb1Q00420 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.88□□□□□ -0.35
Gabpb1Q00420 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Gabpb1Q00420 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.88□□□□□ -0.35
Gabpb1Q00420 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.88□□□□□ -0.35
Gabpb1Q00420 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.88□□□□□ -0.35
Gabpb1Q00420 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.88□□□□□ -0.35
Gabpb1Q00420 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.88□□□□□ -0.35
Gabpb1Q00420 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gabpb1Q00420 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gabpb1Q00420 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gabpb1Q00420 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gabpb1Q00420 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gabpb1Q00420 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gabpb1Q00420 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gabpb1Q00420 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gabpb1Q00420 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gabpb1Q00420 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gabpb1Q00420 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.88□□□□□ -0.35
Gabpb1Q00420 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gabpb1Q00420 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gabpb1Q00420 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Gabpb1Q00420 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Gabpb1Q00420 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gabpb1Q00420 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Gabpb1Q00420 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gabpb1Q00420 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.87□□□□□ -0.35
Gabpb1Q00420 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Gabpb1Q00420 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Gabpb1Q00420 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Gabpb1Q00420 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gabpb1Q00420 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Gabpb1Q00420 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gabpb1Q00420 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Gabpb1Q00420 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gabpb1Q00420 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gabpb1Q00420 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Gabpb1Q00420 Gm14760-201ENSMUST00000121831 999 ntBASIC12.87□□□□□ -0.35
Gabpb1Q00420 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gabpb1Q00420 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Gabpb1Q00420 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Gabpb1Q00420 Gm27682-201ENSMUST00000183930 110 ntBASIC12.87□□□□□ -0.35
Gabpb1Q00420 Gm38092-201ENSMUST00000195600 653 ntBASIC12.87□□□□□ -0.35
Gabpb1Q00420 Gm43433-201ENSMUST00000196573 481 ntBASIC12.87□□□□□ -0.35
Gabpb1Q00420 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gabpb1Q00420 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.87□□□□□ -0.35
Gabpb1Q00420 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.87□□□□□ -0.35
Gabpb1Q00420 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gabpb1Q00420 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gabpb1Q00420 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gabpb1Q00420 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gabpb1Q00420 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.87□□□□□ -0.35
Gabpb1Q00420 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gabpb1Q00420 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gabpb1Q00420 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gabpb1Q00420 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gabpb1Q00420 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Gabpb1Q00420 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gabpb1Q00420 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Gabpb1Q00420 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gabpb1Q00420 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.86□□□□□ -0.35
Gabpb1Q00420 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gabpb1Q00420 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gabpb1Q00420 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gabpb1Q00420 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gabpb1Q00420 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gabpb1Q00420 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gabpb1Q00420 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gabpb1Q00420 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gabpb1Q00420 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Gabpb1Q00420 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gabpb1Q00420 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.86□□□□□ -0.35
Gabpb1Q00420 Gm12384-201ENSMUST00000119228 919 ntBASIC12.86□□□□□ -0.35
Gabpb1Q00420 Gm13492-201ENSMUST00000119772 665 ntBASIC12.86□□□□□ -0.35
Gabpb1Q00420 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Gabpb1Q00420 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.86□□□□□ -0.35
Gabpb1Q00420 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Gabpb1Q00420 Gm1335-201ENSMUST00000121653 386 ntBASIC12.86□□□□□ -0.35
Gabpb1Q00420 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.86□□□□□ -0.35
Gabpb1Q00420 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.86□□□□□ -0.35
Gabpb1Q00420 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Gabpb1Q00420 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Gabpb1Q00420 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.86□□□□□ -0.35
Gabpb1Q00420 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Gabpb1Q00420 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.86□□□□□ -0.35
Gabpb1Q00420 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.86□□□□□ -0.35
Gabpb1Q00420 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gabpb1Q00420 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gabpb1Q00420 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.86□□□□□ -0.35
Gabpb1Q00420 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.86□□□□□ -0.35
Gabpb1Q00420 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gabpb1Q00420 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Gabpb1Q00420 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gabpb1Q00420 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Gabpb1Q00420 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.86□□□□□ -0.35
Gabpb1Q00420 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gabpb1Q00420 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Gabpb1Q00420 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gabpb1Q00420 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms