Protein–RNA interactions for Protein: P98083

Shc1, SHC-transforming protein 1, mousemouse

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc1P98083 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shc1P98083 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shc1P98083 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shc1P98083 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shc1P98083 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shc1P98083 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shc1P98083 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shc1P98083 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shc1P98083 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Shc1P98083 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shc1P98083 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Shc1P98083 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shc1P98083 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Shc1P98083 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shc1P98083 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Shc1P98083 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.41□□□□□ -0.58
Shc1P98083 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shc1P98083 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shc1P98083 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.41□□□□□ -0.58
Shc1P98083 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shc1P98083 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Shc1P98083 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shc1P98083 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shc1P98083 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Shc1P98083 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shc1P98083 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shc1P98083 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shc1P98083 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shc1P98083 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shc1P98083 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.41□□□□□ -0.58
Shc1P98083 Gm38158-201ENSMUST00000194617 339 ntBASIC11.41□□□□□ -0.58
Shc1P98083 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.41□□□□□ -0.58
Shc1P98083 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.41□□□□□ -0.58
Shc1P98083 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shc1P98083 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shc1P98083 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shc1P98083 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shc1P98083 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shc1P98083 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shc1P98083 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Shc1P98083 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Shc1P98083 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Shc1P98083 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shc1P98083 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shc1P98083 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shc1P98083 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.41□□□□□ -0.58
Shc1P98083 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shc1P98083 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shc1P98083 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Shc1P98083 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Shc1P98083 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Shc1P98083 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Shc1P98083 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shc1P98083 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shc1P98083 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shc1P98083 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shc1P98083 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.4□□□□□ -0.58
Shc1P98083 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shc1P98083 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shc1P98083 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shc1P98083 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shc1P98083 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.4□□□□□ -0.58
Shc1P98083 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Shc1P98083 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shc1P98083 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shc1P98083 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Shc1P98083 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shc1P98083 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Shc1P98083 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Shc1P98083 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.4□□□□□ -0.58
Shc1P98083 Gm16296-201ENSMUST00000159905 325 ntBASIC11.4□□□□□ -0.58
Shc1P98083 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.4□□□□□ -0.58
Shc1P98083 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.4□□□□□ -0.58
Shc1P98083 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Shc1P98083 Gm43118-201ENSMUST00000199149 775 ntBASIC11.4□□□□□ -0.58
Shc1P98083 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.4□□□□□ -0.58
Shc1P98083 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.4□□□□□ -0.58
Shc1P98083 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.4□□□□□ -0.58
Shc1P98083 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shc1P98083 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shc1P98083 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shc1P98083 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Shc1P98083 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Shc1P98083 Paupar-201ENSMUST00000194826 3482 ntBASIC11.4□□□□□ -0.58
Shc1P98083 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.4□□□□□ -0.58
Shc1P98083 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shc1P98083 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shc1P98083 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shc1P98083 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Shc1P98083 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Shc1P98083 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shc1P98083 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.4□□□□□ -0.58
Shc1P98083 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shc1P98083 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shc1P98083 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.4□□□□□ -0.58
Shc1P98083 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Shc1P98083 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Shc1P98083 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Shc1P98083 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Shc1P98083 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms