Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Scn1bP97952 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC11.6□□□□□ -0.55
Scn1bP97952 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scn1bP97952 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Scn1bP97952 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scn1bP97952 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scn1bP97952 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
Scn1bP97952 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scn1bP97952 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scn1bP97952 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scn1bP97952 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Scn1bP97952 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scn1bP97952 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scn1bP97952 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.6□□□□□ -0.55
Scn1bP97952 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scn1bP97952 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scn1bP97952 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Scn1bP97952 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Scn1bP97952 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Scn1bP97952 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scn1bP97952 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scn1bP97952 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scn1bP97952 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.59□□□□□ -0.55
Scn1bP97952 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Scn1bP97952 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.59□□□□□ -0.55
Scn1bP97952 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Scn1bP97952 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Scn1bP97952 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Scn1bP97952 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Scn1bP97952 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Scn1bP97952 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scn1bP97952 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scn1bP97952 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC11.59□□□□□ -0.55
Scn1bP97952 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scn1bP97952 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scn1bP97952 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scn1bP97952 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scn1bP97952 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scn1bP97952 Gm15693-201ENSMUST00000120470 637 ntBASIC11.59□□□□□ -0.55
Scn1bP97952 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.59□□□□□ -0.55
Scn1bP97952 Gm24420-201ENSMUST00000176676 59 ntBASIC11.59□□□□□ -0.55
Scn1bP97952 Gm38294-201ENSMUST00000192831 381 ntBASIC11.59□□□□□ -0.55
Scn1bP97952 Gm37277-201ENSMUST00000194052 1111 ntBASIC11.59□□□□□ -0.55
Scn1bP97952 Gm6888-201ENSMUST00000221983 706 ntBASIC11.59□□□□□ -0.55
Scn1bP97952 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scn1bP97952 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Scn1bP97952 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Scn1bP97952 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Scn1bP97952 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scn1bP97952 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Scn1bP97952 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scn1bP97952 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Scn1bP97952 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scn1bP97952 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
Scn1bP97952 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.59□□□□□ -0.55
Scn1bP97952 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Scn1bP97952 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scn1bP97952 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Scn1bP97952 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scn1bP97952 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Scn1bP97952 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scn1bP97952 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.55
Scn1bP97952 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Scn1bP97952 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Scn1bP97952 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Scn1bP97952 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scn1bP97952 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Scn1bP97952 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scn1bP97952 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.58□□□□□ -0.56
Scn1bP97952 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scn1bP97952 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scn1bP97952 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scn1bP97952 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scn1bP97952 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scn1bP97952 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Scn1bP97952 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scn1bP97952 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scn1bP97952 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scn1bP97952 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Scn1bP97952 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scn1bP97952 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC11.58□□□□□ -0.56
Scn1bP97952 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC11.58□□□□□ -0.56
Scn1bP97952 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Scn1bP97952 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Scn1bP97952 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.58□□□□□ -0.56
Scn1bP97952 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC11.58□□□□□ -0.56
Scn1bP97952 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC11.58□□□□□ -0.56
Scn1bP97952 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scn1bP97952 Gm9630-201ENSMUST00000178304 885 ntBASIC11.58□□□□□ -0.56
Scn1bP97952 Gm6283-201ENSMUST00000182369 1000 ntBASIC11.58□□□□□ -0.56
Scn1bP97952 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Scn1bP97952 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC11.58□□□□□ -0.56
Scn1bP97952 AC153872.1-201ENSMUST00000199539 128 ntBASIC11.58□□□□□ -0.56
Scn1bP97952 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC11.58□□□□□ -0.56
Scn1bP97952 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.58□□□□□ -0.56
Scn1bP97952 AC156016.3-201ENSMUST00000228623 344 ntBASIC11.58□□□□□ -0.56
Scn1bP97952 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Scn1bP97952 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Scn1bP97952 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scn1bP97952 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms