Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cacna1aP97445 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Cacna1aP97445 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC11.72□□□□□ -0.53
Cacna1aP97445 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cacna1aP97445 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.72□□□□□ -0.53
Cacna1aP97445 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cacna1aP97445 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cacna1aP97445 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cacna1aP97445 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cacna1aP97445 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cacna1aP97445 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cacna1aP97445 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cacna1aP97445 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cacna1aP97445 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC11.71□□□□□ -0.53
Cacna1aP97445 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cacna1aP97445 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.71□□□□□ -0.53
Cacna1aP97445 Gm8492-201ENSMUST00000182375 987 ntBASIC11.71□□□□□ -0.53
Cacna1aP97445 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.71□□□□□ -0.53
Cacna1aP97445 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.71□□□□□ -0.53
Cacna1aP97445 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cacna1aP97445 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.71□□□□□ -0.53
Cacna1aP97445 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.71□□□□□ -0.53
Cacna1aP97445 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cacna1aP97445 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Cacna1aP97445 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cacna1aP97445 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Cacna1aP97445 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cacna1aP97445 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Cacna1aP97445 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cacna1aP97445 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Cacna1aP97445 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cacna1aP97445 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cacna1aP97445 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cacna1aP97445 Gm42941-201ENSMUST00000200347 1321 ntBASIC11.71□□□□□ -0.53
Cacna1aP97445 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Cacna1aP97445 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cacna1aP97445 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cacna1aP97445 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cacna1aP97445 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cacna1aP97445 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.71□□□□□ -0.54
Cacna1aP97445 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.54
Cacna1aP97445 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC11.71□□□□□ -0.54
Cacna1aP97445 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Cacna1aP97445 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.71□□□□□ -0.54
Cacna1aP97445 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.71□□□□□ -0.54
Cacna1aP97445 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cacna1aP97445 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cacna1aP97445 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Cacna1aP97445 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.54
Cacna1aP97445 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cacna1aP97445 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Cacna1aP97445 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.71□□□□□ -0.54
Cacna1aP97445 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.71□□□□□ -0.54
Cacna1aP97445 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cacna1aP97445 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cacna1aP97445 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Cacna1aP97445 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cacna1aP97445 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.7□□□□□ -0.54
Cacna1aP97445 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cacna1aP97445 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cacna1aP97445 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Cacna1aP97445 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Cacna1aP97445 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.7□□□□□ -0.54
Cacna1aP97445 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Cacna1aP97445 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Cacna1aP97445 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.7□□□□□ -0.54
Cacna1aP97445 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.7□□□□□ -0.54
Cacna1aP97445 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cacna1aP97445 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cacna1aP97445 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Cacna1aP97445 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cacna1aP97445 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cacna1aP97445 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cacna1aP97445 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cacna1aP97445 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cacna1aP97445 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cacna1aP97445 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cacna1aP97445 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cacna1aP97445 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cacna1aP97445 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cacna1aP97445 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cacna1aP97445 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cacna1aP97445 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cacna1aP97445 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cacna1aP97445 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.7□□□□□ -0.54
Cacna1aP97445 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cacna1aP97445 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC11.7□□□□□ -0.54
Cacna1aP97445 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cacna1aP97445 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.7□□□□□ -0.54
Cacna1aP97445 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC11.7□□□□□ -0.54
Cacna1aP97445 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Cacna1aP97445 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cacna1aP97445 Gm39404-201ENSMUST00000216350 313 ntBASIC11.7□□□□□ -0.54
Cacna1aP97445 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.7□□□□□ -0.54
Cacna1aP97445 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cacna1aP97445 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cacna1aP97445 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cacna1aP97445 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cacna1aP97445 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cacna1aP97445 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms