Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Gm12502-201ENSMUST00000120197 444 ntBASIC13.78□□□□□ -0.2
Trim43cP86449 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43cP86449 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43cP86449 Gm16379-201ENSMUST00000161469 348 ntBASIC13.78□□□□□ -0.2
Trim43cP86449 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.78□□□□□ -0.2
Trim43cP86449 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43cP86449 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trim43cP86449 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC13.78□□□□□ -0.2
Trim43cP86449 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.78□□□□□ -0.2
Trim43cP86449 Gm8762-201ENSMUST00000193486 339 ntBASIC13.78□□□□□ -0.2
Trim43cP86449 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trim43cP86449 Gm44124-201ENSMUST00000204159 472 ntBASIC13.78□□□□□ -0.2
Trim43cP86449 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.78□□□□□ -0.2
Trim43cP86449 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.78□□□□□ -0.2
Trim43cP86449 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Trim43cP86449 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43cP86449 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.78□□□□□ -0.2
Trim43cP86449 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43cP86449 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Trim43cP86449 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43cP86449 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43cP86449 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43cP86449 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43cP86449 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43cP86449 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43cP86449 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trim43cP86449 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43cP86449 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43cP86449 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.77□□□□□ -0.2
Trim43cP86449 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim43cP86449 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.77□□□□□ -0.2
Trim43cP86449 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Trim43cP86449 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43cP86449 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43cP86449 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43cP86449 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43cP86449 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.77□□□□□ -0.21
Trim43cP86449 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43cP86449 Gm13736-201ENSMUST00000119272 253 ntBASIC13.77□□□□□ -0.21
Trim43cP86449 Gm11597-201ENSMUST00000121423 964 ntBASIC13.77□□□□□ -0.21
Trim43cP86449 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.77□□□□□ -0.21
Trim43cP86449 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43cP86449 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43cP86449 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43cP86449 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43cP86449 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.77□□□□□ -0.21
Trim43cP86449 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Trim43cP86449 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.77□□□□□ -0.21
Trim43cP86449 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.77□□□□□ -0.21
Trim43cP86449 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.77□□□□□ -0.21
Trim43cP86449 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.77□□□□□ -0.21
Trim43cP86449 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43cP86449 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43cP86449 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43cP86449 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43cP86449 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43cP86449 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43cP86449 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43cP86449 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43cP86449 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43cP86449 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43cP86449 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43cP86449 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43cP86449 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43cP86449 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43cP86449 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Trim43cP86449 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43cP86449 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43cP86449 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trim43cP86449 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43cP86449 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43cP86449 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trim43cP86449 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trim43cP86449 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43cP86449 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43cP86449 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trim43cP86449 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43cP86449 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim43cP86449 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43cP86449 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43cP86449 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.76□□□□□ -0.21
Trim43cP86449 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43cP86449 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43cP86449 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43cP86449 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.76□□□□□ -0.21
Trim43cP86449 Gm8018-201ENSMUST00000173536 789 ntBASIC13.76□□□□□ -0.21
Trim43cP86449 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Trim43cP86449 Gm44487-201ENSMUST00000205145 325 ntBASIC13.76□□□□□ -0.21
Trim43cP86449 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim43cP86449 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.76□□□□□ -0.21
Trim43cP86449 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim43cP86449 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43cP86449 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.76□□□□□ -0.21
Trim43cP86449 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43cP86449 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43cP86449 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trim43cP86449 Gm38273-201ENSMUST00000194987 2382 ntBASIC13.76□□□□□ -0.21
Trim43cP86449 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43cP86449 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43cP86449 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms