Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC13.08□□□□□ -0.32
Trim43bP86448 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43bP86448 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43bP86448 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trim43bP86448 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trim43bP86448 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43bP86448 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43bP86448 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Trim43bP86448 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43bP86448 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trim43bP86448 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43bP86448 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43bP86448 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trim43bP86448 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.07□□□□□ -0.32
Trim43bP86448 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43bP86448 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43bP86448 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43bP86448 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.07□□□□□ -0.32
Trim43bP86448 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43bP86448 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim43bP86448 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Trim43bP86448 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43bP86448 Gm6152-201ENSMUST00000151704 340 ntBASIC13.07□□□□□ -0.32
Trim43bP86448 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43bP86448 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43bP86448 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trim43bP86448 Gm27839-201ENSMUST00000184242 106 ntBASIC13.07□□□□□ -0.32
Trim43bP86448 Gm29649-201ENSMUST00000185649 419 ntBASIC13.07□□□□□ -0.32
Trim43bP86448 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim43bP86448 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43bP86448 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.07□□□□□ -0.32
Trim43bP86448 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim43bP86448 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.07□□□□□ -0.32
Trim43bP86448 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43bP86448 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.07□□□□□ -0.32
Trim43bP86448 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trim43bP86448 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43bP86448 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43bP86448 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43bP86448 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43bP86448 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43bP86448 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43bP86448 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43bP86448 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trim43bP86448 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Trim43bP86448 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
Trim43bP86448 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43bP86448 Gm38273-201ENSMUST00000194987 2382 ntBASIC13.07□□□□□ -0.32
Trim43bP86448 AC157950.1-201ENSMUST00000217561 2168 ntBASIC13.07□□□□□ -0.32
Trim43bP86448 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43bP86448 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43bP86448 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43bP86448 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43bP86448 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43bP86448 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.07□□□□□ -0.32
Trim43bP86448 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43bP86448 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43bP86448 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43bP86448 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43bP86448 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43bP86448 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43bP86448 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43bP86448 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43bP86448 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43bP86448 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43bP86448 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43bP86448 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43bP86448 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim43bP86448 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43bP86448 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trim43bP86448 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43bP86448 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim43bP86448 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Trim43bP86448 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43bP86448 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43bP86448 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43bP86448 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43bP86448 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43bP86448 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43bP86448 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trim43bP86448 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43bP86448 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43bP86448 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43bP86448 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43bP86448 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trim43bP86448 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43bP86448 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43bP86448 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trim43bP86448 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43bP86448 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43bP86448 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43bP86448 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43bP86448 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43bP86448 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43bP86448 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43bP86448 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43bP86448 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43bP86448 Gm8213-201ENSMUST00000118191 441 ntBASIC13.05□□□□□ -0.32
Trim43bP86448 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43bP86448 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms