Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ldb1P70662 Gm8099-201ENSMUST00000200510 742 ntBASIC12.62□□□□□ -0.39
Ldb1P70662 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Ldb1P70662 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.62□□□□□ -0.39
Ldb1P70662 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.62□□□□□ -0.39
Ldb1P70662 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ldb1P70662 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.62□□□□□ -0.39
Ldb1P70662 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ldb1P70662 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.62□□□□□ -0.39
Ldb1P70662 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ldb1P70662 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.62□□□□□ -0.39
Ldb1P70662 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ldb1P70662 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ldb1P70662 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Ldb1P70662 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ldb1P70662 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ldb1P70662 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Ldb1P70662 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ldb1P70662 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ldb1P70662 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Ldb1P70662 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ldb1P70662 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ldb1P70662 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ldb1P70662 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ldb1P70662 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ldb1P70662 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ldb1P70662 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ldb1P70662 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Ldb1P70662 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ldb1P70662 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.61□□□□□ -0.39
Ldb1P70662 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ldb1P70662 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Ldb1P70662 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.61□□□□□ -0.39
Ldb1P70662 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.61□□□□□ -0.39
Ldb1P70662 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.61□□□□□ -0.39
Ldb1P70662 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.61□□□□□ -0.39
Ldb1P70662 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Ldb1P70662 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ldb1P70662 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ldb1P70662 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ldb1P70662 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ldb1P70662 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ldb1P70662 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ldb1P70662 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.61□□□□□ -0.39
Ldb1P70662 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.61□□□□□ -0.39
Ldb1P70662 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ldb1P70662 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Ldb1P70662 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ldb1P70662 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
Ldb1P70662 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ldb1P70662 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ldb1P70662 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ldb1P70662 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ldb1P70662 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ldb1P70662 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ldb1P70662 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ldb1P70662 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ldb1P70662 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ldb1P70662 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Ldb1P70662 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Ldb1P70662 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ldb1P70662 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ldb1P70662 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ldb1P70662 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ldb1P70662 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.6□□□□□ -0.39
Ldb1P70662 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ldb1P70662 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ldb1P70662 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ldb1P70662 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ldb1P70662 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ldb1P70662 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ldb1P70662 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ldb1P70662 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ldb1P70662 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.6□□□□□ -0.39
Ldb1P70662 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ldb1P70662 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.6□□□□□ -0.39
Ldb1P70662 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ldb1P70662 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.6□□□□□ -0.39
Ldb1P70662 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.6□□□□□ -0.39
Ldb1P70662 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Ldb1P70662 Gm26927-201ENSMUST00000182385 965 ntBASIC12.6□□□□□ -0.39
Ldb1P70662 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ldb1P70662 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ldb1P70662 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.6□□□□□ -0.39
Ldb1P70662 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.6□□□□□ -0.39
Ldb1P70662 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ldb1P70662 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ldb1P70662 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ldb1P70662 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ldb1P70662 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ldb1P70662 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.6□□□□□ -0.39
Ldb1P70662 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ldb1P70662 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ldb1P70662 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ldb1P70662 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ldb1P70662 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.6□□□□□ -0.39
Ldb1P70662 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ldb1P70662 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ldb1P70662 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ldb1P70662 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms