Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Shox2P70390 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Shox2P70390 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shox2P70390 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shox2P70390 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
Shox2P70390 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shox2P70390 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.5□□□□□ -0.41
Shox2P70390 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.5□□□□□ -0.41
Shox2P70390 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shox2P70390 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shox2P70390 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shox2P70390 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shox2P70390 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Shox2P70390 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shox2P70390 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shox2P70390 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Shox2P70390 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shox2P70390 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Shox2P70390 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shox2P70390 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.5□□□□□ -0.41
Shox2P70390 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shox2P70390 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Shox2P70390 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shox2P70390 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shox2P70390 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.5□□□□□ -0.41
Shox2P70390 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shox2P70390 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shox2P70390 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.5□□□□□ -0.41
Shox2P70390 Gm26315-201ENSMUST00000083890 321 ntBASIC12.5□□□□□ -0.41
Shox2P70390 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shox2P70390 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shox2P70390 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shox2P70390 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
Shox2P70390 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.5□□□□□ -0.41
Shox2P70390 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Shox2P70390 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Shox2P70390 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shox2P70390 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shox2P70390 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Shox2P70390 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Shox2P70390 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Shox2P70390 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.5□□□□□ -0.41
Shox2P70390 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shox2P70390 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shox2P70390 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shox2P70390 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.5□□□□□ -0.41
Shox2P70390 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Shox2P70390 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shox2P70390 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Shox2P70390 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shox2P70390 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shox2P70390 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.5□□□□□ -0.41
Shox2P70390 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shox2P70390 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shox2P70390 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shox2P70390 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Shox2P70390 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shox2P70390 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shox2P70390 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shox2P70390 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shox2P70390 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shox2P70390 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.49□□□□□ -0.41
Shox2P70390 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shox2P70390 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.49□□□□□ -0.41
Shox2P70390 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Shox2P70390 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shox2P70390 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.49□□□□□ -0.41
Shox2P70390 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.49□□□□□ -0.41
Shox2P70390 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Shox2P70390 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shox2P70390 Gm15693-201ENSMUST00000120470 637 ntBASIC12.49□□□□□ -0.41
Shox2P70390 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.49□□□□□ -0.41
Shox2P70390 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC12.49□□□□□ -0.41
Shox2P70390 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Shox2P70390 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Shox2P70390 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.49□□□□□ -0.41
Shox2P70390 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC12.49□□□□□ -0.41
Shox2P70390 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Shox2P70390 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shox2P70390 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shox2P70390 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Shox2P70390 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shox2P70390 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.49□□□□□ -0.41
Shox2P70390 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shox2P70390 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shox2P70390 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shox2P70390 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.49□□□□□ -0.41
Shox2P70390 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.49□□□□□ -0.41
Shox2P70390 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shox2P70390 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shox2P70390 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Shox2P70390 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Shox2P70390 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.49□□□□□ -0.41
Shox2P70390 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Shox2P70390 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shox2P70390 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Shox2P70390 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Shox2P70390 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shox2P70390 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shox2P70390 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms