Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Msx3P70354 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Msx3P70354 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Msx3P70354 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Msx3P70354 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Msx3P70354 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Msx3P70354 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Msx3P70354 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.04□□□□□ -0.32
Msx3P70354 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Msx3P70354 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Msx3P70354 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Msx3P70354 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Msx3P70354 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Msx3P70354 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Msx3P70354 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Msx3P70354 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Msx3P70354 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Msx3P70354 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Msx3P70354 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Msx3P70354 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Msx3P70354 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Msx3P70354 Gm7029-201ENSMUST00000173226 450 ntBASIC13.03□□□□□ -0.32
Msx3P70354 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Msx3P70354 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.03□□□□□ -0.32
Msx3P70354 Gm7653-201ENSMUST00000214567 508 ntBASIC13.03□□□□□ -0.32
Msx3P70354 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Msx3P70354 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Msx3P70354 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Msx3P70354 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Msx3P70354 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Msx3P70354 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Msx3P70354 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.03□□□□□ -0.32
Msx3P70354 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Msx3P70354 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Msx3P70354 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.03□□□□□ -0.32
Msx3P70354 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Msx3P70354 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Msx3P70354 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.03□□□□□ -0.32
Msx3P70354 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.03□□□□□ -0.32
Msx3P70354 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Msx3P70354 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Msx3P70354 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Msx3P70354 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Msx3P70354 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.02□□□□□ -0.32
Msx3P70354 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Msx3P70354 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Msx3P70354 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Msx3P70354 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Msx3P70354 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Msx3P70354 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Msx3P70354 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Msx3P70354 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.02□□□□□ -0.32
Msx3P70354 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Msx3P70354 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Msx3P70354 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Msx3P70354 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Msx3P70354 Gm13492-201ENSMUST00000119772 665 ntBASIC13.02□□□□□ -0.33
Msx3P70354 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.02□□□□□ -0.33
Msx3P70354 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Msx3P70354 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.02□□□□□ -0.33
Msx3P70354 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Msx3P70354 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Msx3P70354 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Msx3P70354 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Msx3P70354 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Msx3P70354 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Msx3P70354 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Msx3P70354 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Msx3P70354 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Msx3P70354 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Msx3P70354 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Msx3P70354 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Msx3P70354 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Msx3P70354 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Msx3P70354 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Msx3P70354 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Msx3P70354 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Msx3P70354 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Msx3P70354 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Msx3P70354 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Msx3P70354 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Msx3P70354 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Msx3P70354 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Msx3P70354 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Msx3P70354 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Msx3P70354 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Msx3P70354 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Msx3P70354 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Msx3P70354 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Msx3P70354 Gm14760-201ENSMUST00000121831 999 ntBASIC13.01□□□□□ -0.33
Msx3P70354 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Msx3P70354 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Msx3P70354 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Msx3P70354 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.01□□□□□ -0.33
Msx3P70354 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.01□□□□□ -0.33
Msx3P70354 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Msx3P70354 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Msx3P70354 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.01□□□□□ -0.33
Msx3P70354 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Msx3P70354 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms