Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC20.33■□□□□ 0.84
Cux2P70298 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Cux2P70298 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cux2P70298 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC20.33■□□□□ 0.84
Cux2P70298 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Cux2P70298 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Cux2P70298 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cux2P70298 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cux2P70298 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Cux2P70298 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cux2P70298 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC20.33■□□□□ 0.84
Cux2P70298 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cux2P70298 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Cux2P70298 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Cux2P70298 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC20.32■□□□□ 0.84
Cux2P70298 Gm19680-201ENSMUST00000095050 1513 ntBASIC20.32■□□□□ 0.84
Cux2P70298 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC20.32■□□□□ 0.84
Cux2P70298 Gm15004-201ENSMUST00000119192 630 ntBASIC20.32■□□□□ 0.84
Cux2P70298 Gm12943-201ENSMUST00000119616 210 ntBASIC20.32■□□□□ 0.84
Cux2P70298 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cux2P70298 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cux2P70298 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC20.32■□□□□ 0.84
Cux2P70298 AC165154.1-201ENSMUST00000226661 340 ntBASIC20.32■□□□□ 0.84
Cux2P70298 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cux2P70298 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cux2P70298 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cux2P70298 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cux2P70298 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC20.32■□□□□ 0.84
Cux2P70298 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cux2P70298 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cux2P70298 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cux2P70298 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cux2P70298 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cux2P70298 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cux2P70298 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cux2P70298 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Cux2P70298 Gm43677-201ENSMUST00000198098 2378 ntBASIC20.31■□□□□ 0.84
Cux2P70298 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cux2P70298 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Cux2P70298 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cux2P70298 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cux2P70298 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cux2P70298 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Cux2P70298 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Cux2P70298 Gm14760-201ENSMUST00000121831 999 ntBASIC20.31■□□□□ 0.84
Cux2P70298 Gm3150-201ENSMUST00000166418 204 ntBASIC20.31■□□□□ 0.84
Cux2P70298 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cux2P70298 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cux2P70298 Gm16380-201ENSMUST00000077997 478 ntBASIC20.31■□□□□ 0.84
Cux2P70298 Gm44056-201ENSMUST00000204623 1427 ntBASIC20.31■□□□□ 0.84
Cux2P70298 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Cux2P70298 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Cux2P70298 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cux2P70298 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cux2P70298 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cux2P70298 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC20.31■□□□□ 0.84
Cux2P70298 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cux2P70298 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cux2P70298 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cux2P70298 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
Cux2P70298 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cux2P70298 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Cux2P70298 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cux2P70298 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Cux2P70298 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cux2P70298 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cux2P70298 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cux2P70298 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cux2P70298 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Cux2P70298 Gm5638-201ENSMUST00000118618 1258 ntBASIC20.3■□□□□ 0.84
Cux2P70298 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC20.3■□□□□ 0.84
Cux2P70298 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cux2P70298 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC20.3■□□□□ 0.84
Cux2P70298 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cux2P70298 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC20.3■□□□□ 0.84
Cux2P70298 AC129308.3-201ENSMUST00000225652 524 ntBASIC20.3■□□□□ 0.84
Cux2P70298 AC112945.1-201ENSMUST00000226413 514 ntBASIC20.3■□□□□ 0.84
Cux2P70298 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cux2P70298 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cux2P70298 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cux2P70298 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cux2P70298 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Cux2P70298 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC20.3■□□□□ 0.84
Cux2P70298 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Cux2P70298 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC20.3■□□□□ 0.84
Cux2P70298 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cux2P70298 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cux2P70298 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cux2P70298 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cux2P70298 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cux2P70298 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC20.29■□□□□ 0.84
Cux2P70298 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC20.29■□□□□ 0.84
Cux2P70298 Gm15207-201ENSMUST00000119259 442 ntBASIC20.29■□□□□ 0.84
Cux2P70298 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Cux2P70298 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC20.29■□□□□ 0.84
Cux2P70298 Gm26134-201ENSMUST00000178484 110 ntBASIC20.29■□□□□ 0.84
Cux2P70298 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC20.29■□□□□ 0.84
Cux2P70298 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC20.29■□□□□ 0.84
Cux2P70298 Gm8342-201ENSMUST00000209839 757 ntBASIC20.29■□□□□ 0.84
Cux2P70298 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms