Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.99□□□□□ -0.17
Hmgb1P63158 Gm26035-201ENSMUST00000083065 308 ntBASIC13.99□□□□□ -0.17
Hmgb1P63158 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Hmgb1P63158 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb1P63158 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb1P63158 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb1P63158 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.99□□□□□ -0.17
Hmgb1P63158 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb1P63158 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.99□□□□□ -0.17
Hmgb1P63158 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb1P63158 Tmem56-207ENSMUST00000155309 2230 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb1P63158 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb1P63158 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb1P63158 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb1P63158 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb1P63158 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb1P63158 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb1P63158 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC13.99□□□□□ -0.17
Hmgb1P63158 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb1P63158 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb1P63158 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb1P63158 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgb1P63158 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Hmgb1P63158 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgb1P63158 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgb1P63158 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.98□□□□□ -0.17
Hmgb1P63158 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.98□□□□□ -0.17
Hmgb1P63158 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgb1P63158 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgb1P63158 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgb1P63158 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgb1P63158 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.98□□□□□ -0.17
Hmgb1P63158 Gm14928-201ENSMUST00000120198 477 ntBASIC13.98□□□□□ -0.17
Hmgb1P63158 Gm16479-201ENSMUST00000121706 932 ntBASIC13.98□□□□□ -0.17
Hmgb1P63158 Mir1894-201ENSMUST00000122802 81 ntBASIC13.98□□□□□ -0.17
Hmgb1P63158 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.98□□□□□ -0.17
Hmgb1P63158 Gm26185-201ENSMUST00000157692 266 ntBASIC13.98□□□□□ -0.17
Hmgb1P63158 Gm22121-201ENSMUST00000175148 54 ntBASIC13.98□□□□□ -0.17
Hmgb1P63158 Gm9630-201ENSMUST00000178304 885 ntBASIC13.98□□□□□ -0.17
Hmgb1P63158 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.98□□□□□ -0.17
Hmgb1P63158 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.98□□□□□ -0.17
Hmgb1P63158 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Hmgb1P63158 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgb1P63158 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgb1P63158 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.98□□□□□ -0.17
Hmgb1P63158 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgb1P63158 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgb1P63158 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Hmgb1P63158 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgb1P63158 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgb1P63158 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Hmgb1P63158 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgb1P63158 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgb1P63158 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgb1P63158 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Hmgb1P63158 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.98□□□□□ -0.17
Hmgb1P63158 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgb1P63158 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgb1P63158 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgb1P63158 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Hmgb1P63158 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb1P63158 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb1P63158 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb1P63158 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb1P63158 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb1P63158 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.97□□□□□ -0.17
Hmgb1P63158 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb1P63158 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb1P63158 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb1P63158 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb1P63158 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb1P63158 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.97□□□□□ -0.17
Hmgb1P63158 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb1P63158 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb1P63158 Gm8810-201ENSMUST00000172895 754 ntBASIC13.97□□□□□ -0.17
Hmgb1P63158 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.97□□□□□ -0.17
Hmgb1P63158 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.97□□□□□ -0.17
Hmgb1P63158 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.97□□□□□ -0.17
Hmgb1P63158 Gm37042-201ENSMUST00000193816 581 ntBASIC13.97□□□□□ -0.17
Hmgb1P63158 Gm44124-201ENSMUST00000204159 472 ntBASIC13.97□□□□□ -0.17
Hmgb1P63158 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb1P63158 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.97□□□□□ -0.17
Hmgb1P63158 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.97□□□□□ -0.17
Hmgb1P63158 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Hmgb1P63158 Gm10012-201ENSMUST00000078252 192 ntBASIC13.97□□□□□ -0.17
Hmgb1P63158 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb1P63158 Gm43014-201ENSMUST00000198568 2443 ntBASIC13.97□□□□□ -0.17
Hmgb1P63158 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.97□□□□□ -0.17
Hmgb1P63158 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb1P63158 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb1P63158 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC13.97□□□□□ -0.17
Hmgb1P63158 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.97□□□□□ -0.17
Hmgb1P63158 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb1P63158 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb1P63158 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb1P63158 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb1P63158 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb1P63158 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb1P63158 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Hmgb1P63158 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms