Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Lsm5P62322 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Lsm5P62322 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Lsm5P62322 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Lsm5P62322 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Lsm5P62322 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Lsm5P62322 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Lsm5P62322 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Lsm5P62322 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC10.54□□□□□ -0.72
Lsm5P62322 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC10.54□□□□□ -0.72
Lsm5P62322 Gm29608-201ENSMUST00000190444 463 ntBASIC10.54□□□□□ -0.72
Lsm5P62322 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC10.54□□□□□ -0.72
Lsm5P62322 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Lsm5P62322 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.54□□□□□ -0.72
Lsm5P62322 AC154846.1-201ENSMUST00000226278 862 ntBASIC10.54□□□□□ -0.72
Lsm5P62322 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Lsm5P62322 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Lsm5P62322 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Lsm5P62322 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Lsm5P62322 Gm10175-201ENSMUST00000086013 645 ntBASIC10.54□□□□□ -0.72
Lsm5P62322 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Lsm5P62322 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Lsm5P62322 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Lsm5P62322 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Lsm5P62322 Gm42706-201ENSMUST00000199733 1910 ntBASIC10.54□□□□□ -0.72
Lsm5P62322 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Lsm5P62322 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Lsm5P62322 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Lsm5P62322 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC10.54□□□□□ -0.72
Lsm5P62322 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC10.54□□□□□ -0.72
Lsm5P62322 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Lsm5P62322 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Lsm5P62322 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Lsm5P62322 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Lsm5P62322 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Lsm5P62322 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
Lsm5P62322 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Lsm5P62322 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Lsm5P62322 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Lsm5P62322 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Lsm5P62322 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Lsm5P62322 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm5P62322 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm5P62322 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Lsm5P62322 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Lsm5P62322 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm5P62322 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm5P62322 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm5P62322 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm5P62322 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm5P62322 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
Lsm5P62322 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm5P62322 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm5P62322 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm5P62322 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Lsm5P62322 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Lsm5P62322 Gm6415-201ENSMUST00000118488 348 ntBASIC10.53□□□□□ -0.72
Lsm5P62322 Gm14494-201ENSMUST00000118786 435 ntBASIC10.53□□□□□ -0.72
Lsm5P62322 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm5P62322 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm5P62322 Gm27533-201ENSMUST00000183800 152 ntBASIC10.53□□□□□ -0.72
Lsm5P62322 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm5P62322 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC10.53□□□□□ -0.72
Lsm5P62322 Gm5779-201ENSMUST00000218467 910 ntBASIC10.53□□□□□ -0.72
Lsm5P62322 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.53□□□□□ -0.72
Lsm5P62322 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm5P62322 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm5P62322 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
Lsm5P62322 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm5P62322 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm5P62322 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Lsm5P62322 Gm5161-201ENSMUST00000075243 853 ntBASIC10.53□□□□□ -0.72
Lsm5P62322 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm5P62322 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Lsm5P62322 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Lsm5P62322 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC10.53□□□□□ -0.72
Lsm5P62322 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm5P62322 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm5P62322 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm5P62322 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm5P62322 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm5P62322 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm5P62322 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm5P62322 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm5P62322 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC10.53□□□□□ -0.72
Lsm5P62322 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm5P62322 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm5P62322 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm5P62322 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm5P62322 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm5P62322 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm5P62322 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm5P62322 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm5P62322 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm5P62322 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Lsm5P62322 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Lsm5P62322 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Lsm5P62322 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Lsm5P62322 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Lsm5P62322 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms