Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lsm6P62313 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.15□□□□□ -0.62
Lsm6P62313 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lsm6P62313 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Lsm6P62313 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Lsm6P62313 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Lsm6P62313 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Lsm6P62313 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Lsm6P62313 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm6P62313 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm6P62313 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm6P62313 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm6P62313 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm6P62313 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
Lsm6P62313 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm6P62313 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Lsm6P62313 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm6P62313 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm6P62313 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm6P62313 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm6P62313 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.14□□□□□ -0.63
Lsm6P62313 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm6P62313 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm6P62313 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Lsm6P62313 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm6P62313 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm6P62313 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.14□□□□□ -0.63
Lsm6P62313 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm6P62313 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm6P62313 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm6P62313 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
Lsm6P62313 Gm15703-201ENSMUST00000120250 880 ntBASIC11.14□□□□□ -0.63
Lsm6P62313 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm6P62313 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.14□□□□□ -0.63
Lsm6P62313 Gm16296-201ENSMUST00000159905 325 ntBASIC11.14□□□□□ -0.63
Lsm6P62313 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm6P62313 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.14□□□□□ -0.63
Lsm6P62313 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.14□□□□□ -0.63
Lsm6P62313 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.14□□□□□ -0.63
Lsm6P62313 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.14□□□□□ -0.63
Lsm6P62313 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm6P62313 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm6P62313 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.14□□□□□ -0.63
Lsm6P62313 Gm43818-201ENSMUST00000200605 466 ntBASIC11.14□□□□□ -0.63
Lsm6P62313 Gm32025-201ENSMUST00000217960 307 ntBASIC11.14□□□□□ -0.63
Lsm6P62313 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm6P62313 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm6P62313 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm6P62313 AC140375.2-201ENSMUST00000225283 584 ntBASIC11.14□□□□□ -0.63
Lsm6P62313 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.14□□□□□ -0.63
Lsm6P62313 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm6P62313 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm6P62313 Gm24526-201ENSMUST00000082921 158 ntBASIC11.14□□□□□ -0.63
Lsm6P62313 Gm10268-201ENSMUST00000085340 555 ntBASIC11.14□□□□□ -0.63
Lsm6P62313 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm6P62313 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm6P62313 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm6P62313 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm6P62313 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm6P62313 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm6P62313 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm6P62313 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.14□□□□□ -0.63
Lsm6P62313 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm6P62313 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm6P62313 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm6P62313 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.14□□□□□ -0.63
Lsm6P62313 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm6P62313 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm6P62313 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm6P62313 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm6P62313 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm6P62313 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm6P62313 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm6P62313 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.13□□□□□ -0.63
Lsm6P62313 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.13□□□□□ -0.63
Lsm6P62313 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
Lsm6P62313 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm6P62313 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm6P62313 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm6P62313 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.13□□□□□ -0.63
Lsm6P62313 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm6P62313 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm6P62313 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm6P62313 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm6P62313 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm6P62313 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm6P62313 Gm4984-201ENSMUST00000115987 360 ntBASIC11.13□□□□□ -0.63
Lsm6P62313 Gm16177-201ENSMUST00000120728 718 ntBASIC11.13□□□□□ -0.63
Lsm6P62313 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm6P62313 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.13□□□□□ -0.63
Lsm6P62313 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Lsm6P62313 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.13□□□□□ -0.63
Lsm6P62313 Gm9630-201ENSMUST00000178304 885 ntBASIC11.13□□□□□ -0.63
Lsm6P62313 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm6P62313 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm6P62313 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.13□□□□□ -0.63
Lsm6P62313 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.13□□□□□ -0.63
Lsm6P62313 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm6P62313 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.13□□□□□ -0.63
Lsm6P62313 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms