Protein–RNA interactions for Protein: P61588

Rnd3, Rho-related GTP-binding protein RhoE, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnd3P61588 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Rnd3P61588 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rnd3P61588 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
Rnd3P61588 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Rnd3P61588 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Rnd3P61588 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rnd3P61588 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Rnd3P61588 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Rnd3P61588 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rnd3P61588 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rnd3P61588 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Rnd3P61588 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rnd3P61588 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rnd3P61588 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rnd3P61588 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Rnd3P61588 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rnd3P61588 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Rnd3P61588 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rnd3P61588 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.5□□□□□ -0.73
Rnd3P61588 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnd3P61588 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnd3P61588 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnd3P61588 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Rnd3P61588 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC10.49□□□□□ -0.73
Rnd3P61588 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Rnd3P61588 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnd3P61588 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnd3P61588 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Rnd3P61588 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnd3P61588 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rnd3P61588 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnd3P61588 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rnd3P61588 Gm14719-201ENSMUST00000121891 340 ntBASIC10.49□□□□□ -0.73
Rnd3P61588 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rnd3P61588 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rnd3P61588 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rnd3P61588 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Rnd3P61588 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Rnd3P61588 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Rnd3P61588 Gm28693-202ENSMUST00000190758 331 ntBASIC10.49□□□□□ -0.73
Rnd3P61588 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC10.49□□□□□ -0.73
Rnd3P61588 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC10.49□□□□□ -0.73
Rnd3P61588 Gm43575-201ENSMUST00000196420 516 ntBASIC10.49□□□□□ -0.73
Rnd3P61588 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
Rnd3P61588 Gm19220-201ENSMUST00000222682 803 ntBASIC10.49□□□□□ -0.73
Rnd3P61588 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnd3P61588 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC10.49□□□□□ -0.73
Rnd3P61588 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnd3P61588 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnd3P61588 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnd3P61588 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.49□□□□□ -0.73
Rnd3P61588 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Rnd3P61588 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnd3P61588 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnd3P61588 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Rnd3P61588 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Rnd3P61588 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC10.49□□□□□ -0.73
Rnd3P61588 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnd3P61588 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnd3P61588 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Rnd3P61588 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Rnd3P61588 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnd3P61588 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnd3P61588 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnd3P61588 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnd3P61588 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Rnd3P61588 Gm18227-201ENSMUST00000211082 1468 ntBASIC10.49□□□□□ -0.73
Rnd3P61588 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Rnd3P61588 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rnd3P61588 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rnd3P61588 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rnd3P61588 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rnd3P61588 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Rnd3P61588 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rnd3P61588 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rnd3P61588 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Rnd3P61588 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC10.48□□□□□ -0.73
Rnd3P61588 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rnd3P61588 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rnd3P61588 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
Rnd3P61588 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
Rnd3P61588 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rnd3P61588 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
Rnd3P61588 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rnd3P61588 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Rnd3P61588 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Rnd3P61588 Gm15321-201ENSMUST00000121290 288 ntBASIC10.48□□□□□ -0.73
Rnd3P61588 Gm13394-201ENSMUST00000121658 1000 ntBASIC10.48□□□□□ -0.73
Rnd3P61588 Gm14760-201ENSMUST00000121831 999 ntBASIC10.48□□□□□ -0.73
Rnd3P61588 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Rnd3P61588 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.48□□□□□ -0.73
Rnd3P61588 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rnd3P61588 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rnd3P61588 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rnd3P61588 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rnd3P61588 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rnd3P61588 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rnd3P61588 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC10.48□□□□□ -0.73
Rnd3P61588 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rnd3P61588 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms