Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC9.08□□□□□ -0.96
Cks1bP61025 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC9.08□□□□□ -0.96
Cks1bP61025 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC9.08□□□□□ -0.96
Cks1bP61025 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC9.08□□□□□ -0.96
Cks1bP61025 Gm6916-202ENSMUST00000205523 195 ntBASIC9.08□□□□□ -0.96
Cks1bP61025 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC9.08□□□□□ -0.96
Cks1bP61025 AC131997.1-201ENSMUST00000228611 1229 ntBASIC9.08□□□□□ -0.96
Cks1bP61025 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1bP61025 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Cks1bP61025 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1bP61025 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1bP61025 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1bP61025 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Cks1bP61025 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC9.08□□□□□ -0.96
Cks1bP61025 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1bP61025 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1bP61025 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1bP61025 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC9.08□□□□□ -0.96
Cks1bP61025 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1bP61025 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1bP61025 Olfr1090-202ENSMUST00000215991 2103 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Cks1bP61025 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1bP61025 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1bP61025 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Cks1bP61025 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1bP61025 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
Cks1bP61025 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1bP61025 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1bP61025 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1bP61025 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cks1bP61025 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cks1bP61025 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Cks1bP61025 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Cks1bP61025 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Cks1bP61025 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cks1bP61025 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cks1bP61025 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cks1bP61025 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cks1bP61025 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cks1bP61025 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
Cks1bP61025 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cks1bP61025 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Cks1bP61025 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cks1bP61025 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Cks1bP61025 Gm44891-201ENSMUST00000208817 2223 ntBASIC9.07□□□□□ -0.96
Cks1bP61025 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC9.07□□□□□ -0.96
Cks1bP61025 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Cks1bP61025 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC9.07□□□□□ -0.96
Cks1bP61025 Gm15770-201ENSMUST00000117498 584 ntBASIC9.07□□□□□ -0.96
Cks1bP61025 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC9.07□□□□□ -0.96
Cks1bP61025 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cks1bP61025 Gm18889-201ENSMUST00000174284 929 ntBASIC9.07□□□□□ -0.96
Cks1bP61025 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC9.07□□□□□ -0.96
Cks1bP61025 AC155252.2-201ENSMUST00000226946 680 ntBASIC9.07□□□□□ -0.96
Cks1bP61025 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cks1bP61025 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cks1bP61025 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cks1bP61025 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cks1bP61025 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cks1bP61025 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Cks1bP61025 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Cks1bP61025 Mir497b-201ENSMUST00000093601 125 ntBASIC9.07□□□□□ -0.96
Cks1bP61025 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Cks1bP61025 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Cks1bP61025 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cks1bP61025 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cks1bP61025 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Cks1bP61025 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cks1bP61025 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC9.07□□□□□ -0.96
Cks1bP61025 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Cks1bP61025 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cks1bP61025 Vmn1r184-207ENSMUST00000228369 6361 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Cks1bP61025 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cks1bP61025 Gm43522-201ENSMUST00000196697 1922 ntBASIC9.07□□□□□ -0.96
Cks1bP61025 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cks1bP61025 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cks1bP61025 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC9.07□□□□□ -0.96
Cks1bP61025 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Cks1bP61025 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Cks1bP61025 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Cks1bP61025 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1bP61025 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1bP61025 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Cks1bP61025 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1bP61025 Wdcp-201ENSMUST00000053034 2892 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1bP61025 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1bP61025 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Cks1bP61025 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Cks1bP61025 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC9.06□□□□□ -0.96
Cks1bP61025 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1bP61025 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1bP61025 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Cks1bP61025 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1bP61025 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Cks1bP61025 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1bP61025 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1bP61025 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1bP61025 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1bP61025 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Cks1bP61025 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms