Protein–RNA interactions for Protein: P57080

Usp25, Ubiquitin carboxyl-terminal hydrolase 25, mousemouse

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp25P57080 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp25P57080 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.11
Usp25P57080 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp25P57080 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp25P57080 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Usp25P57080 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp25P57080 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Usp25P57080 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp25P57080 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp25P57080 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp25P57080 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp25P57080 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp25P57080 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Usp25P57080 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp25P57080 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.33□□□□□ -0.12
Usp25P57080 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp25P57080 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp25P57080 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Usp25P57080 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp25P57080 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp25P57080 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp25P57080 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp25P57080 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Usp25P57080 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp25P57080 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Usp25P57080 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp25P57080 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp25P57080 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp25P57080 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp25P57080 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC14.33□□□□□ -0.12
Usp25P57080 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp25P57080 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp25P57080 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp25P57080 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp25P57080 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Usp25P57080 Gm18983-201ENSMUST00000222884 2729 ntBASIC14.33□□□□□ -0.12
Usp25P57080 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Usp25P57080 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp25P57080 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.33□□□□□ -0.12
Usp25P57080 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp25P57080 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp25P57080 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp25P57080 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC14.33□□□□□ -0.12
Usp25P57080 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp25P57080 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC14.32□□□□□ -0.12
Usp25P57080 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp25P57080 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp25P57080 Gm42943-201ENSMUST00000199676 3242 ntBASIC14.32□□□□□ -0.12
Usp25P57080 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp25P57080 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Usp25P57080 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp25P57080 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp25P57080 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Usp25P57080 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.32□□□□□ -0.12
Usp25P57080 Gm16202-201ENSMUST00000117532 544 ntBASIC14.32□□□□□ -0.12
Usp25P57080 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.32□□□□□ -0.12
Usp25P57080 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp25P57080 Gm42612-201ENSMUST00000197986 623 ntBASIC14.32□□□□□ -0.12
Usp25P57080 Gm43170-201ENSMUST00000199827 612 ntBASIC14.32□□□□□ -0.12
Usp25P57080 Gm44069-201ENSMUST00000204898 506 ntBASIC14.32□□□□□ -0.12
Usp25P57080 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.32□□□□□ -0.12
Usp25P57080 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Usp25P57080 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Usp25P57080 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp25P57080 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp25P57080 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp25P57080 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC14.32□□□□□ -0.12
Usp25P57080 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp25P57080 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Usp25P57080 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp25P57080 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp25P57080 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp25P57080 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp25P57080 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp25P57080 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Usp25P57080 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp25P57080 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp25P57080 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp25P57080 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp25P57080 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Usp25P57080 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp25P57080 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp25P57080 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp25P57080 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Usp25P57080 Gm22189-201ENSMUST00000103822 86 ntBASIC14.31□□□□□ -0.12
Usp25P57080 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp25P57080 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Usp25P57080 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.31□□□□□ -0.12
Usp25P57080 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC14.31□□□□□ -0.12
Usp25P57080 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp25P57080 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp25P57080 Gm27437-201ENSMUST00000183429 107 ntBASIC14.31□□□□□ -0.12
Usp25P57080 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.31□□□□□ -0.12
Usp25P57080 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14.31□□□□□ -0.12
Usp25P57080 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.31□□□□□ -0.12
Usp25P57080 Ighv8-10-201ENSMUST00000199579 358 ntBASIC14.31□□□□□ -0.12
Usp25P57080 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp25P57080 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.31□□□□□ -0.12
Usp25P57080 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp25P57080 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms