Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sssca1P56873 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Sssca1P56873 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sssca1P56873 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sssca1P56873 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.24□□□□□ -0.77
Sssca1P56873 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
Sssca1P56873 Cog3-203ENSMUST00000227473 4197 ntBASIC10.24□□□□□ -0.77
Sssca1P56873 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sssca1P56873 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sssca1P56873 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sssca1P56873 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sssca1P56873 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sssca1P56873 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sssca1P56873 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sssca1P56873 Gm14350-201ENSMUST00000116642 640 ntBASIC10.24□□□□□ -0.77
Sssca1P56873 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC10.24□□□□□ -0.77
Sssca1P56873 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC10.24□□□□□ -0.77
Sssca1P56873 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC10.24□□□□□ -0.77
Sssca1P56873 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sssca1P56873 Mir6956-201ENSMUST00000183598 62 ntBASIC10.24□□□□□ -0.77
Sssca1P56873 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sssca1P56873 Gm44397-201ENSMUST00000195950 113 ntBASIC10.24□□□□□ -0.77
Sssca1P56873 Ighv8-10-201ENSMUST00000199579 358 ntBASIC10.24□□□□□ -0.77
Sssca1P56873 Gm44069-201ENSMUST00000204898 506 ntBASIC10.24□□□□□ -0.77
Sssca1P56873 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC10.24□□□□□ -0.77
Sssca1P56873 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC10.24□□□□□ -0.77
Sssca1P56873 Gm19220-201ENSMUST00000222682 803 ntBASIC10.24□□□□□ -0.77
Sssca1P56873 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sssca1P56873 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sssca1P56873 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sssca1P56873 Gm16372-201ENSMUST00000073088 450 ntBASIC10.24□□□□□ -0.77
Sssca1P56873 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sssca1P56873 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sssca1P56873 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sssca1P56873 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sssca1P56873 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sssca1P56873 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC10.24□□□□□ -0.77
Sssca1P56873 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Sssca1P56873 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sssca1P56873 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sssca1P56873 AC101945.2-201ENSMUST00000227886 1377 ntBASIC10.24□□□□□ -0.77
Sssca1P56873 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sssca1P56873 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sssca1P56873 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sssca1P56873 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Sssca1P56873 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sssca1P56873 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sssca1P56873 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sssca1P56873 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Sssca1P56873 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sssca1P56873 Gm43061-201ENSMUST00000198850 2241 ntBASIC10.23□□□□□ -0.77
Sssca1P56873 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC10.23□□□□□ -0.77
Sssca1P56873 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sssca1P56873 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sssca1P56873 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sssca1P56873 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sssca1P56873 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Sssca1P56873 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Sssca1P56873 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Sssca1P56873 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Sssca1P56873 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Sssca1P56873 Gm22189-201ENSMUST00000103822 86 ntBASIC10.23□□□□□ -0.77
Sssca1P56873 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Sssca1P56873 Gm15321-201ENSMUST00000121290 288 ntBASIC10.23□□□□□ -0.77
Sssca1P56873 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Sssca1P56873 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC10.23□□□□□ -0.77
Sssca1P56873 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC10.23□□□□□ -0.77
Sssca1P56873 Gm18916-201ENSMUST00000198264 1246 ntBASIC10.23□□□□□ -0.77
Sssca1P56873 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Sssca1P56873 Gm6983-201ENSMUST00000214912 628 ntBASIC10.23□□□□□ -0.77
Sssca1P56873 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sssca1P56873 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.23□□□□□ -0.77
Sssca1P56873 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sssca1P56873 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.23□□□□□ -0.77
Sssca1P56873 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sssca1P56873 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Sssca1P56873 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sssca1P56873 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sssca1P56873 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.23□□□□□ -0.77
Sssca1P56873 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sssca1P56873 CT025678.1-201ENSMUST00000214795 2972 ntBASIC10.23□□□□□ -0.77
Sssca1P56873 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sssca1P56873 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Sssca1P56873 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
Sssca1P56873 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Sssca1P56873 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Sssca1P56873 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sssca1P56873 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Sssca1P56873 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sssca1P56873 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sssca1P56873 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Sssca1P56873 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sssca1P56873 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Sssca1P56873 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sssca1P56873 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Sssca1P56873 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sssca1P56873 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.22□□□□□ -0.77
Sssca1P56873 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sssca1P56873 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sssca1P56873 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 91.4 ms