Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nub1P54729 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.69□□□□□ -0.22
Nub1P54729 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.69□□□□□ -0.22
Nub1P54729 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nub1P54729 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nub1P54729 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nub1P54729 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.69□□□□□ -0.22
Nub1P54729 Gm11591-201ENSMUST00000120063 702 ntBASIC13.69□□□□□ -0.22
Nub1P54729 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.69□□□□□ -0.22
Nub1P54729 Snora78-201ENSMUST00000158630 128 ntBASIC13.69□□□□□ -0.22
Nub1P54729 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.69□□□□□ -0.22
Nub1P54729 Gm27514-201ENSMUST00000183692 110 ntBASIC13.69□□□□□ -0.22
Nub1P54729 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.69□□□□□ -0.22
Nub1P54729 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nub1P54729 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.69□□□□□ -0.22
Nub1P54729 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.69□□□□□ -0.22
Nub1P54729 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Nub1P54729 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nub1P54729 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Nub1P54729 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nub1P54729 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nub1P54729 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nub1P54729 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nub1P54729 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nub1P54729 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nub1P54729 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nub1P54729 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nub1P54729 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nub1P54729 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nub1P54729 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nub1P54729 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nub1P54729 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nub1P54729 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nub1P54729 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nub1P54729 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.68□□□□□ -0.22
Nub1P54729 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nub1P54729 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nub1P54729 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Nub1P54729 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.68□□□□□ -0.22
Nub1P54729 AC123738.2-201ENSMUST00000223791 1899 ntBASIC13.68□□□□□ -0.22
Nub1P54729 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nub1P54729 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.68□□□□□ -0.22
Nub1P54729 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Nub1P54729 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Nub1P54729 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nub1P54729 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nub1P54729 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.68□□□□□ -0.22
Nub1P54729 Gm23363-201ENSMUST00000175024 79 ntBASIC13.68□□□□□ -0.22
Nub1P54729 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.68□□□□□ -0.22
Nub1P54729 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.68□□□□□ -0.22
Nub1P54729 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nub1P54729 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nub1P54729 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nub1P54729 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nub1P54729 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nub1P54729 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nub1P54729 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nub1P54729 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nub1P54729 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nub1P54729 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.68□□□□□ -0.22
Nub1P54729 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nub1P54729 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.68□□□□□ -0.22
Nub1P54729 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Nub1P54729 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nub1P54729 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nub1P54729 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Nub1P54729 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.68□□□□□ -0.22
Nub1P54729 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nub1P54729 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nub1P54729 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nub1P54729 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nub1P54729 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nub1P54729 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nub1P54729 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.67□□□□□ -0.22
Nub1P54729 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nub1P54729 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nub1P54729 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nub1P54729 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nub1P54729 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Nub1P54729 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nub1P54729 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nub1P54729 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.67□□□□□ -0.22
Nub1P54729 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
Nub1P54729 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nub1P54729 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.67□□□□□ -0.22
Nub1P54729 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Nub1P54729 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.67□□□□□ -0.22
Nub1P54729 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.67□□□□□ -0.22
Nub1P54729 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.67□□□□□ -0.22
Nub1P54729 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nub1P54729 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Nub1P54729 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nub1P54729 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nub1P54729 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nub1P54729 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nub1P54729 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Nub1P54729 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nub1P54729 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nub1P54729 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nub1P54729 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms