Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.54□□□□□ -0.4
Pdx1P52946 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdx1P52946 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pdx1P52946 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.54□□□□□ -0.4
Pdx1P52946 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.54□□□□□ -0.4
Pdx1P52946 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.54□□□□□ -0.4
Pdx1P52946 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.54□□□□□ -0.4
Pdx1P52946 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.54□□□□□ -0.4
Pdx1P52946 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.54□□□□□ -0.4
Pdx1P52946 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdx1P52946 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdx1P52946 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Pdx1P52946 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.54□□□□□ -0.4
Pdx1P52946 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdx1P52946 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Pdx1P52946 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pdx1P52946 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.54□□□□□ -0.4
Pdx1P52946 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdx1P52946 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdx1P52946 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdx1P52946 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pdx1P52946 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdx1P52946 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdx1P52946 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdx1P52946 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdx1P52946 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.54□□□□□ -0.4
Pdx1P52946 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.53□□□□□ -0.4
Pdx1P52946 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Pdx1P52946 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pdx1P52946 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdx1P52946 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdx1P52946 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdx1P52946 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdx1P52946 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pdx1P52946 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdx1P52946 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdx1P52946 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pdx1P52946 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdx1P52946 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdx1P52946 Gm12742-201ENSMUST00000117326 410 ntBASIC12.53□□□□□ -0.4
Pdx1P52946 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.53□□□□□ -0.4
Pdx1P52946 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.53□□□□□ -0.4
Pdx1P52946 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pdx1P52946 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdx1P52946 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.53□□□□□ -0.4
Pdx1P52946 Gm45880-201ENSMUST00000213041 853 ntBASIC12.53□□□□□ -0.4
Pdx1P52946 Gm19309-201ENSMUST00000218295 205 ntBASIC12.53□□□□□ -0.4
Pdx1P52946 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.53□□□□□ -0.4
Pdx1P52946 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.53□□□□□ -0.4
Pdx1P52946 Gm9823-201ENSMUST00000051212 327 ntBASIC12.53□□□□□ -0.4
Pdx1P52946 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Pdx1P52946 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdx1P52946 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdx1P52946 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdx1P52946 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.53□□□□□ -0.4
Pdx1P52946 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdx1P52946 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdx1P52946 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.53□□□□□ -0.4
Pdx1P52946 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pdx1P52946 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.53□□□□□ -0.4
Pdx1P52946 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdx1P52946 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pdx1P52946 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Pdx1P52946 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.53□□□□□ -0.4
Pdx1P52946 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.53□□□□□ -0.4
Pdx1P52946 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Pdx1P52946 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdx1P52946 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Pdx1P52946 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pdx1P52946 Daam2-202ENSMUST00000224595 1926 ntBASIC12.52□□□□□ -0.4
Pdx1P52946 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pdx1P52946 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Pdx1P52946 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
Pdx1P52946 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pdx1P52946 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Pdx1P52946 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pdx1P52946 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pdx1P52946 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pdx1P52946 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Pdx1P52946 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pdx1P52946 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pdx1P52946 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pdx1P52946 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pdx1P52946 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pdx1P52946 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Pdx1P52946 Gm13392-201ENSMUST00000117708 150 ntBASIC12.52□□□□□ -0.41
Pdx1P52946 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.52□□□□□ -0.41
Pdx1P52946 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.52□□□□□ -0.41
Pdx1P52946 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Pdx1P52946 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pdx1P52946 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.52□□□□□ -0.41
Pdx1P52946 Gm27572-201ENSMUST00000183702 255 ntBASIC12.52□□□□□ -0.41
Pdx1P52946 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Pdx1P52946 Gm38002-201ENSMUST00000193255 180 ntBASIC12.52□□□□□ -0.41
Pdx1P52946 Gm18054-201ENSMUST00000207539 555 ntBASIC12.52□□□□□ -0.41
Pdx1P52946 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.52□□□□□ -0.41
Pdx1P52946 Gm5781-201ENSMUST00000219792 443 ntBASIC12.52□□□□□ -0.41
Pdx1P52946 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.52□□□□□ -0.41
Pdx1P52946 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pdx1P52946 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms