Protein–RNA interactions for Protein: P52194

Clgn, Calmegin, mousemouse

Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClgnP52194 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.97□□□□□ -0.33
ClgnP52194 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ClgnP52194 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClgnP52194 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.97□□□□□ -0.33
ClgnP52194 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.97□□□□□ -0.33
ClgnP52194 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClgnP52194 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClgnP52194 Proscos-202ENSMUST00000178990 666 ntBASIC12.97□□□□□ -0.33
ClgnP52194 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClgnP52194 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ClgnP52194 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClgnP52194 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ClgnP52194 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClgnP52194 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClgnP52194 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClgnP52194 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClgnP52194 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClgnP52194 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClgnP52194 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ClgnP52194 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
ClgnP52194 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ClgnP52194 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClgnP52194 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClgnP52194 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.97□□□□□ -0.33
ClgnP52194 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
ClgnP52194 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ClgnP52194 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClgnP52194 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClgnP52194 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClgnP52194 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ClgnP52194 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ClgnP52194 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ClgnP52194 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ClgnP52194 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
ClgnP52194 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ClgnP52194 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ClgnP52194 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ClgnP52194 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ClgnP52194 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ClgnP52194 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
ClgnP52194 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ClgnP52194 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ClgnP52194 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.96□□□□□ -0.33
ClgnP52194 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
ClgnP52194 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ClgnP52194 Gm2231-201ENSMUST00000125661 612 ntBASIC12.96□□□□□ -0.33
ClgnP52194 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.96□□□□□ -0.33
ClgnP52194 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.96□□□□□ -0.33
ClgnP52194 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
ClgnP52194 Gm28693-202ENSMUST00000190758 331 ntBASIC12.96□□□□□ -0.33
ClgnP52194 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.96□□□□□ -0.33
ClgnP52194 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.96□□□□□ -0.33
ClgnP52194 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
ClgnP52194 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.96□□□□□ -0.33
ClgnP52194 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ClgnP52194 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ClgnP52194 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ClgnP52194 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
ClgnP52194 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.96□□□□□ -0.33
ClgnP52194 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.96□□□□□ -0.33
ClgnP52194 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ClgnP52194 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ClgnP52194 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
ClgnP52194 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ClgnP52194 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
ClgnP52194 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
ClgnP52194 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.96□□□□□ -0.34
ClgnP52194 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ClgnP52194 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
ClgnP52194 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.96□□□□□ -0.34
ClgnP52194 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
ClgnP52194 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.96□□□□□ -0.34
ClgnP52194 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ClgnP52194 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.95□□□□□ -0.34
ClgnP52194 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
ClgnP52194 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClgnP52194 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClgnP52194 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClgnP52194 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClgnP52194 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
ClgnP52194 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClgnP52194 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClgnP52194 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClgnP52194 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClgnP52194 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ClgnP52194 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
ClgnP52194 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClgnP52194 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ClgnP52194 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClgnP52194 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ClgnP52194 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.95□□□□□ -0.34
ClgnP52194 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.95□□□□□ -0.34
ClgnP52194 Gm6458-201ENSMUST00000211573 635 ntBASIC12.95□□□□□ -0.34
ClgnP52194 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.95□□□□□ -0.34
ClgnP52194 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClgnP52194 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClgnP52194 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClgnP52194 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.95□□□□□ -0.34
ClgnP52194 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClgnP52194 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms