Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC13.97□□□□□ -0.17
Brca1P48754 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Brca1P48754 Gm4879-201ENSMUST00000122190 1272 ntBASIC13.97□□□□□ -0.17
Brca1P48754 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Brca1P48754 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC13.97□□□□□ -0.17
Brca1P48754 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC13.97□□□□□ -0.17
Brca1P48754 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Brca1P48754 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC13.97□□□□□ -0.17
Brca1P48754 Gm21092-201ENSMUST00000178995 955 ntBASIC13.97□□□□□ -0.17
Brca1P48754 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC13.97□□□□□ -0.17
Brca1P48754 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC13.97□□□□□ -0.17
Brca1P48754 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Brca1P48754 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Brca1P48754 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Brca1P48754 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Brca1P48754 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Brca1P48754 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Brca1P48754 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Brca1P48754 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
Brca1P48754 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Brca1P48754 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Brca1P48754 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Brca1P48754 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Brca1P48754 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Brca1P48754 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Brca1P48754 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Brca1P48754 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Brca1P48754 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Brca1P48754 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Brca1P48754 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Brca1P48754 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Brca1P48754 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Brca1P48754 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Brca1P48754 AC159376.1-201ENSMUST00000218504 630 ntBASIC13.96□□□□□ -0.17
Brca1P48754 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Brca1P48754 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Brca1P48754 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.96□□□□□ -0.18
Brca1P48754 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Brca1P48754 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Brca1P48754 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC13.96□□□□□ -0.18
Brca1P48754 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Brca1P48754 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Brca1P48754 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.95□□□□□ -0.18
Brca1P48754 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Brca1P48754 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Brca1P48754 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Brca1P48754 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC13.95□□□□□ -0.18
Brca1P48754 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Brca1P48754 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Brca1P48754 Gm24891-201ENSMUST00000104391 136 ntBASIC13.95□□□□□ -0.18
Brca1P48754 Gm13263-201ENSMUST00000121271 838 ntBASIC13.95□□□□□ -0.18
Brca1P48754 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC13.95□□□□□ -0.18
Brca1P48754 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Brca1P48754 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC13.95□□□□□ -0.18
Brca1P48754 Gm12407-201ENSMUST00000180219 324 ntBASIC13.95□□□□□ -0.18
Brca1P48754 Gm28388-201ENSMUST00000186262 437 ntBASIC13.95□□□□□ -0.18
Brca1P48754 Gm43692-201ENSMUST00000198236 1062 ntBASIC13.95□□□□□ -0.18
Brca1P48754 Gm7902-201ENSMUST00000198842 947 ntBASIC13.95□□□□□ -0.18
Brca1P48754 Gm44270-201ENSMUST00000203084 1234 ntBASIC13.95□□□□□ -0.18
Brca1P48754 Gm7395-201ENSMUST00000216059 1045 ntBASIC13.95□□□□□ -0.18
Brca1P48754 AC140375.1-201ENSMUST00000225421 694 ntBASIC13.95□□□□□ -0.18
Brca1P48754 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Brca1P48754 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Brca1P48754 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Brca1P48754 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Brca1P48754 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Brca1P48754 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Brca1P48754 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Brca1P48754 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Brca1P48754 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Brca1P48754 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Brca1P48754 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Brca1P48754 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Brca1P48754 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Brca1P48754 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.95□□□□□ -0.18
Brca1P48754 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Brca1P48754 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Brca1P48754 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Brca1P48754 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Brca1P48754 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Brca1P48754 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Brca1P48754 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Brca1P48754 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC13.94□□□□□ -0.18
Brca1P48754 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Brca1P48754 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC13.94□□□□□ -0.18
Brca1P48754 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC13.94□□□□□ -0.18
Brca1P48754 Arhgef33-207ENSMUST00000224966 490 ntBASIC13.94□□□□□ -0.18
Brca1P48754 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Brca1P48754 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Brca1P48754 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Brca1P48754 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.94□□□□□ -0.18
Brca1P48754 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC13.94□□□□□ -0.18
Brca1P48754 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Brca1P48754 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Brca1P48754 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Brca1P48754 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Brca1P48754 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Brca1P48754 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Brca1P48754 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Brca1P48754 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms