Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.2□□□□□ -0.46
Prox1P48437 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prox1P48437 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Prox1P48437 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Prox1P48437 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.2□□□□□ -0.46
Prox1P48437 Gm27838-201ENSMUST00000184829 128 ntBASIC12.2□□□□□ -0.46
Prox1P48437 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Prox1P48437 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Prox1P48437 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Prox1P48437 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.2□□□□□ -0.46
Prox1P48437 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.2□□□□□ -0.46
Prox1P48437 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.2□□□□□ -0.46
Prox1P48437 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.2□□□□□ -0.46
Prox1P48437 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prox1P48437 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prox1P48437 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prox1P48437 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Prox1P48437 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Prox1P48437 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prox1P48437 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.2□□□□□ -0.46
Prox1P48437 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Prox1P48437 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Prox1P48437 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Prox1P48437 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.2□□□□□ -0.46
Prox1P48437 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Prox1P48437 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prox1P48437 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prox1P48437 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prox1P48437 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prox1P48437 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prox1P48437 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Prox1P48437 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Prox1P48437 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.19□□□□□ -0.46
Prox1P48437 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Prox1P48437 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.19□□□□□ -0.46
Prox1P48437 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Prox1P48437 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.19□□□□□ -0.46
Prox1P48437 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Prox1P48437 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prox1P48437 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.19□□□□□ -0.46
Prox1P48437 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Prox1P48437 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.19□□□□□ -0.46
Prox1P48437 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.19□□□□□ -0.46
Prox1P48437 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Prox1P48437 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.19□□□□□ -0.46
Prox1P48437 Gm42550-201ENSMUST00000201553 960 ntBASIC12.19□□□□□ -0.46
Prox1P48437 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.19□□□□□ -0.46
Prox1P48437 Gm7730-201ENSMUST00000212486 454 ntBASIC12.19□□□□□ -0.46
Prox1P48437 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.19□□□□□ -0.46
Prox1P48437 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prox1P48437 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prox1P48437 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Prox1P48437 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prox1P48437 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.19□□□□□ -0.46
Prox1P48437 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.19□□□□□ -0.46
Prox1P48437 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prox1P48437 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prox1P48437 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prox1P48437 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prox1P48437 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prox1P48437 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prox1P48437 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Prox1P48437 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.18□□□□□ -0.46
Prox1P48437 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prox1P48437 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Prox1P48437 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prox1P48437 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Prox1P48437 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prox1P48437 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prox1P48437 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prox1P48437 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prox1P48437 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.18□□□□□ -0.46
Prox1P48437 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Prox1P48437 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Prox1P48437 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.18□□□□□ -0.46
Prox1P48437 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Prox1P48437 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prox1P48437 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Prox1P48437 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Prox1P48437 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Prox1P48437 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.18□□□□□ -0.46
Prox1P48437 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Prox1P48437 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Prox1P48437 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prox1P48437 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.18□□□□□ -0.46
Prox1P48437 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prox1P48437 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Prox1P48437 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prox1P48437 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prox1P48437 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prox1P48437 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Prox1P48437 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.18□□□□□ -0.46
Prox1P48437 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Prox1P48437 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.18□□□□□ -0.46
Prox1P48437 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.18□□□□□ -0.46
Prox1P48437 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prox1P48437 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Prox1P48437 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.17□□□□□ -0.46
Prox1P48437 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prox1P48437 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms