Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gli1P47806 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Gli1P47806 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Gli1P47806 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gli1P47806 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gli1P47806 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Gli1P47806 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gli1P47806 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.4□□□□□ -0.42
Gli1P47806 Gm15376-201ENSMUST00000122258 783 ntBASIC12.4□□□□□ -0.42
Gli1P47806 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.4□□□□□ -0.42
Gli1P47806 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.4□□□□□ -0.42
Gli1P47806 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gli1P47806 Gm29127-201ENSMUST00000188304 517 ntBASIC12.4□□□□□ -0.42
Gli1P47806 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Gli1P47806 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.4□□□□□ -0.42
Gli1P47806 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Gli1P47806 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.4□□□□□ -0.42
Gli1P47806 Gm9257-201ENSMUST00000221254 232 ntBASIC12.4□□□□□ -0.42
Gli1P47806 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gli1P47806 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.4□□□□□ -0.42
Gli1P47806 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Gli1P47806 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gli1P47806 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gli1P47806 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gli1P47806 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gli1P47806 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gli1P47806 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Gli1P47806 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gli1P47806 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Gli1P47806 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Gli1P47806 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Gli1P47806 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Gli1P47806 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.39□□□□□ -0.43
Gli1P47806 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Gli1P47806 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Gli1P47806 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gli1P47806 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Gli1P47806 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.39□□□□□ -0.43
Gli1P47806 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Gli1P47806 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gli1P47806 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.39□□□□□ -0.43
Gli1P47806 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Gli1P47806 Gm13689-201ENSMUST00000119360 685 ntBASIC12.39□□□□□ -0.43
Gli1P47806 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.39□□□□□ -0.43
Gli1P47806 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.39□□□□□ -0.43
Gli1P47806 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gli1P47806 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Gli1P47806 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.39□□□□□ -0.43
Gli1P47806 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Gli1P47806 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.39□□□□□ -0.43
Gli1P47806 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gli1P47806 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gli1P47806 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gli1P47806 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.39□□□□□ -0.43
Gli1P47806 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Gli1P47806 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gli1P47806 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gli1P47806 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gli1P47806 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gli1P47806 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gli1P47806 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.39□□□□□ -0.43
Gli1P47806 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gli1P47806 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gli1P47806 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Gli1P47806 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Gli1P47806 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.38□□□□□ -0.43
Gli1P47806 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Gli1P47806 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Gli1P47806 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Gli1P47806 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gli1P47806 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.38□□□□□ -0.43
Gli1P47806 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.38□□□□□ -0.43
Gli1P47806 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.38□□□□□ -0.43
Gli1P47806 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.38□□□□□ -0.43
Gli1P47806 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.38□□□□□ -0.43
Gli1P47806 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gli1P47806 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gli1P47806 Gm15371-201ENSMUST00000117057 784 ntBASIC12.38□□□□□ -0.43
Gli1P47806 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.38□□□□□ -0.43
Gli1P47806 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.38□□□□□ -0.43
Gli1P47806 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.38□□□□□ -0.43
Gli1P47806 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.38□□□□□ -0.43
Gli1P47806 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.38□□□□□ -0.43
Gli1P47806 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.38□□□□□ -0.43
Gli1P47806 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gli1P47806 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.38□□□□□ -0.43
Gli1P47806 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Gli1P47806 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.38□□□□□ -0.43
Gli1P47806 Gm7399-201ENSMUST00000032395 858 ntBASIC12.38□□□□□ -0.43
Gli1P47806 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gli1P47806 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.38□□□□□ -0.43
Gli1P47806 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gli1P47806 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Gli1P47806 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Gli1P47806 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Gli1P47806 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Gli1P47806 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gli1P47806 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Gli1P47806 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gli1P47806 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms