Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hist1h1dP43277 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hist1h1dP43277 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC10.72□□□□□ -0.69
Hist1h1dP43277 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Hist1h1dP43277 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hist1h1dP43277 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hist1h1dP43277 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hist1h1dP43277 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Hist1h1dP43277 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Hist1h1dP43277 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hist1h1dP43277 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hist1h1dP43277 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hist1h1dP43277 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hist1h1dP43277 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hist1h1dP43277 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hist1h1dP43277 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hist1h1dP43277 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC10.72□□□□□ -0.69
Hist1h1dP43277 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC10.72□□□□□ -0.69
Hist1h1dP43277 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hist1h1dP43277 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hist1h1dP43277 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hist1h1dP43277 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Hist1h1dP43277 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Hist1h1dP43277 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hist1h1dP43277 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Hist1h1dP43277 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
Hist1h1dP43277 Gm44872-201ENSMUST00000207864 420 ntBASIC10.72□□□□□ -0.69
Hist1h1dP43277 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC10.72□□□□□ -0.69
Hist1h1dP43277 AC166051.1-201ENSMUST00000214313 210 ntBASIC10.72□□□□□ -0.69
Hist1h1dP43277 Wdyhv1-203ENSMUST00000226889 394 ntBASIC10.72□□□□□ -0.69
Hist1h1dP43277 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hist1h1dP43277 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hist1h1dP43277 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC10.72□□□□□ -0.69
Hist1h1dP43277 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hist1h1dP43277 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hist1h1dP43277 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Hist1h1dP43277 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hist1h1dP43277 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Hist1h1dP43277 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hist1h1dP43277 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hist1h1dP43277 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hist1h1dP43277 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hist1h1dP43277 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Hist1h1dP43277 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hist1h1dP43277 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hist1h1dP43277 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.72□□□□□ -0.69
Hist1h1dP43277 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hist1h1dP43277 Gm40377-201ENSMUST00000204604 2015 ntBASIC10.72□□□□□ -0.69
Hist1h1dP43277 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hist1h1dP43277 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hist1h1dP43277 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hist1h1dP43277 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Hist1h1dP43277 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.72□□□□□ -0.69
Hist1h1dP43277 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hist1h1dP43277 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Hist1h1dP43277 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hist1h1dP43277 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hist1h1dP43277 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hist1h1dP43277 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hist1h1dP43277 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hist1h1dP43277 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hist1h1dP43277 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hist1h1dP43277 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Hist1h1dP43277 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hist1h1dP43277 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hist1h1dP43277 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC10.71□□□□□ -0.69
Hist1h1dP43277 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Hist1h1dP43277 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hist1h1dP43277 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC10.71□□□□□ -0.69
Hist1h1dP43277 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hist1h1dP43277 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hist1h1dP43277 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC10.71□□□□□ -0.69
Hist1h1dP43277 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC10.71□□□□□ -0.69
Hist1h1dP43277 Gm16215-201ENSMUST00000161990 637 ntBASIC10.71□□□□□ -0.69
Hist1h1dP43277 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hist1h1dP43277 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hist1h1dP43277 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Hist1h1dP43277 Gm7063-201ENSMUST00000186840 981 ntBASIC10.71□□□□□ -0.69
Hist1h1dP43277 Gm43365-201ENSMUST00000196522 2106 ntBASIC10.71□□□□□ -0.69
Hist1h1dP43277 Gm43416-201ENSMUST00000201916 1015 ntBASIC10.71□□□□□ -0.69
Hist1h1dP43277 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.71□□□□□ -0.69
Hist1h1dP43277 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Hist1h1dP43277 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC10.71□□□□□ -0.69
Hist1h1dP43277 Gm6218-201ENSMUST00000219812 628 ntBASIC10.71□□□□□ -0.69
Hist1h1dP43277 AC132317.1-201ENSMUST00000227227 962 ntBASIC10.71□□□□□ -0.69
Hist1h1dP43277 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hist1h1dP43277 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Hist1h1dP43277 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hist1h1dP43277 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hist1h1dP43277 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Hist1h1dP43277 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hist1h1dP43277 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hist1h1dP43277 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hist1h1dP43277 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hist1h1dP43277 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC10.71□□□□□ -0.69
Hist1h1dP43277 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Hist1h1dP43277 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Hist1h1dP43277 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Hist1h1dP43277 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Hist1h1dP43277 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms