Protein–RNA interactions for Protein: P41105

Rpl28, 60S ribosomal protein L28, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl28P41105 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Rpl28P41105 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Rpl28P41105 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl28P41105 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl28P41105 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl28P41105 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl28P41105 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC8.53□□□□□ -1.04
Rpl28P41105 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl28P41105 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl28P41105 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Rpl28P41105 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl28P41105 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC8.53□□□□□ -1.04
Rpl28P41105 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl28P41105 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl28P41105 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC8.53□□□□□ -1.04
Rpl28P41105 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl28P41105 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC8.53□□□□□ -1.04
Rpl28P41105 Gm5780-201ENSMUST00000217774 1834 ntBASIC8.53□□□□□ -1.04
Rpl28P41105 Gm12485-201ENSMUST00000119641 291 ntBASIC8.53□□□□□ -1.04
Rpl28P41105 Gm15487-201ENSMUST00000122373 465 ntBASIC8.53□□□□□ -1.04
Rpl28P41105 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC8.53□□□□□ -1.04
Rpl28P41105 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl28P41105 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl28P41105 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC8.53□□□□□ -1.04
Rpl28P41105 Gm27390-201ENSMUST00000184516 176 ntBASIC8.53□□□□□ -1.04
Rpl28P41105 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC8.53□□□□□ -1.04
Rpl28P41105 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Rpl28P41105 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC8.53□□□□□ -1.04
Rpl28P41105 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC8.53□□□□□ -1.04
Rpl28P41105 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC8.53□□□□□ -1.04
Rpl28P41105 AC122305.4-201ENSMUST00000216159 1206 ntBASIC8.53□□□□□ -1.04
Rpl28P41105 Gm17330-201ENSMUST00000221047 165 ntBASIC8.53□□□□□ -1.04
Rpl28P41105 Gm19220-201ENSMUST00000222682 803 ntBASIC8.53□□□□□ -1.04
Rpl28P41105 AC154621.1-201ENSMUST00000226155 1119 ntBASIC8.53□□□□□ -1.04
Rpl28P41105 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl28P41105 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl28P41105 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC8.53□□□□□ -1.04
Rpl28P41105 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Rpl28P41105 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl28P41105 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl28P41105 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl28P41105 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC8.53□□□□□ -1.04
Rpl28P41105 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl28P41105 Gm43174-201ENSMUST00000195914 2445 ntBASIC8.53□□□□□ -1.04
Rpl28P41105 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC8.53□□□□□ -1.04
Rpl28P41105 AC161252.3-201ENSMUST00000225465 1549 ntBASIC8.53□□□□□ -1.04
Rpl28P41105 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl28P41105 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl28P41105 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Rpl28P41105 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Rpl28P41105 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl28P41105 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl28P41105 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl28P41105 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl28P41105 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC8.53□□□□□ -1.04
Rpl28P41105 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl28P41105 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.04
Rpl28P41105 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
Rpl28P41105 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
Rpl28P41105 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Rpl28P41105 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Rpl28P41105 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Rpl28P41105 Gm3365-201ENSMUST00000216296 1480 ntBASIC8.52□□□□□ -1.05
Rpl28P41105 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Rpl28P41105 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Rpl28P41105 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Rpl28P41105 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Rpl28P41105 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Rpl28P41105 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Rpl28P41105 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Rpl28P41105 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Rpl28P41105 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Rpl28P41105 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC8.52□□□□□ -1.05
Rpl28P41105 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Rpl28P41105 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Rpl28P41105 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Rpl28P41105 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
Rpl28P41105 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Rpl28P41105 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC8.52□□□□□ -1.05
Rpl28P41105 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC8.52□□□□□ -1.05
Rpl28P41105 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Rpl28P41105 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC8.52□□□□□ -1.05
Rpl28P41105 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC8.52□□□□□ -1.05
Rpl28P41105 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC8.52□□□□□ -1.05
Rpl28P41105 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
Rpl28P41105 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC8.52□□□□□ -1.05
Rpl28P41105 Gm21854-201ENSMUST00000179901 471 ntBASIC8.52□□□□□ -1.05
Rpl28P41105 Gm29667-201ENSMUST00000190817 490 ntBASIC8.52□□□□□ -1.05
Rpl28P41105 Gm19184-201ENSMUST00000196798 928 ntBASIC8.52□□□□□ -1.05
Rpl28P41105 Gm5279-201ENSMUST00000199575 745 ntBASIC8.52□□□□□ -1.05
Rpl28P41105 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC8.52□□□□□ -1.05
Rpl28P41105 Hist1h2al-201ENSMUST00000091708 339 ntBASIC8.52□□□□□ -1.05
Rpl28P41105 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Rpl28P41105 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Rpl28P41105 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Rpl28P41105 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Rpl28P41105 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Rpl28P41105 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC8.52□□□□□ -1.05
Rpl28P41105 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Rpl28P41105 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms