Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.17□□□□□ -0.46
Cdh4P39038 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.17□□□□□ -0.46
Cdh4P39038 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh4P39038 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh4P39038 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh4P39038 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh4P39038 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh4P39038 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh4P39038 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh4P39038 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh4P39038 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.16□□□□□ -0.46
Cdh4P39038 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh4P39038 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh4P39038 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh4P39038 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh4P39038 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh4P39038 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh4P39038 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.16□□□□□ -0.46
Cdh4P39038 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh4P39038 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh4P39038 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh4P39038 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cdh4P39038 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh4P39038 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cdh4P39038 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh4P39038 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh4P39038 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.16□□□□□ -0.46
Cdh4P39038 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Cdh4P39038 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Cdh4P39038 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.16□□□□□ -0.46
Cdh4P39038 Gm38002-201ENSMUST00000193255 180 ntBASIC12.16□□□□□ -0.46
Cdh4P39038 Gm19309-201ENSMUST00000218295 205 ntBASIC12.16□□□□□ -0.46
Cdh4P39038 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.16□□□□□ -0.46
Cdh4P39038 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.16□□□□□ -0.46
Cdh4P39038 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh4P39038 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh4P39038 Gm9899-201ENSMUST00000065519 555 ntBASIC12.16□□□□□ -0.46
Cdh4P39038 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh4P39038 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh4P39038 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh4P39038 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.16□□□□□ -0.46
Cdh4P39038 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh4P39038 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh4P39038 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh4P39038 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh4P39038 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh4P39038 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh4P39038 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh4P39038 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh4P39038 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Cdh4P39038 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh4P39038 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.16□□□□□ -0.46
Cdh4P39038 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Cdh4P39038 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.16□□□□□ -0.46
Cdh4P39038 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh4P39038 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh4P39038 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cdh4P39038 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdh4P39038 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cdh4P39038 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdh4P39038 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdh4P39038 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdh4P39038 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdh4P39038 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.15□□□□□ -0.46
Cdh4P39038 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Cdh4P39038 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Cdh4P39038 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Cdh4P39038 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.15□□□□□ -0.46
Cdh4P39038 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cdh4P39038 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdh4P39038 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.15□□□□□ -0.46
Cdh4P39038 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.15□□□□□ -0.46
Cdh4P39038 Gm12502-201ENSMUST00000120197 444 ntBASIC12.15□□□□□ -0.46
Cdh4P39038 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.15□□□□□ -0.46
Cdh4P39038 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.15□□□□□ -0.46
Cdh4P39038 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdh4P39038 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdh4P39038 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdh4P39038 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.15□□□□□ -0.46
Cdh4P39038 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdh4P39038 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.15□□□□□ -0.46
Cdh4P39038 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdh4P39038 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdh4P39038 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdh4P39038 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdh4P39038 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdh4P39038 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdh4P39038 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdh4P39038 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdh4P39038 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdh4P39038 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdh4P39038 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdh4P39038 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cdh4P39038 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdh4P39038 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdh4P39038 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cdh4P39038 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cdh4P39038 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.15□□□□□ -0.47
Cdh4P39038 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cdh4P39038 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms