Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.64□□□□□ -0.39
LdlrP35951 Gm13689-201ENSMUST00000119360 685 ntBASIC12.64□□□□□ -0.39
LdlrP35951 Gm13813-201ENSMUST00000120998 787 ntBASIC12.64□□□□□ -0.39
LdlrP35951 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.64□□□□□ -0.39
LdlrP35951 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
LdlrP35951 Gm29649-201ENSMUST00000185649 419 ntBASIC12.64□□□□□ -0.39
LdlrP35951 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.64□□□□□ -0.39
LdlrP35951 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.64□□□□□ -0.39
LdlrP35951 Gm43179-201ENSMUST00000198797 275 ntBASIC12.64□□□□□ -0.39
LdlrP35951 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.64□□□□□ -0.39
LdlrP35951 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.64□□□□□ -0.39
LdlrP35951 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LdlrP35951 Gm10012-201ENSMUST00000078252 192 ntBASIC12.64□□□□□ -0.39
LdlrP35951 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LdlrP35951 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LdlrP35951 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LdlrP35951 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LdlrP35951 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LdlrP35951 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LdlrP35951 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LdlrP35951 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LdlrP35951 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LdlrP35951 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LdlrP35951 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LdlrP35951 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.63□□□□□ -0.39
LdlrP35951 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LdlrP35951 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.63□□□□□ -0.39
LdlrP35951 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LdlrP35951 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
LdlrP35951 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
LdlrP35951 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.63□□□□□ -0.39
LdlrP35951 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LdlrP35951 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LdlrP35951 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.63□□□□□ -0.39
LdlrP35951 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LdlrP35951 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LdlrP35951 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
LdlrP35951 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LdlrP35951 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LdlrP35951 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LdlrP35951 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
LdlrP35951 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LdlrP35951 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.63□□□□□ -0.39
LdlrP35951 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LdlrP35951 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LdlrP35951 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LdlrP35951 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
LdlrP35951 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LdlrP35951 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LdlrP35951 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LdlrP35951 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LdlrP35951 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.63□□□□□ -0.39
LdlrP35951 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.63□□□□□ -0.39
LdlrP35951 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LdlrP35951 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
LdlrP35951 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LdlrP35951 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LdlrP35951 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.63□□□□□ -0.39
LdlrP35951 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
LdlrP35951 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LdlrP35951 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LdlrP35951 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LdlrP35951 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LdlrP35951 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LdlrP35951 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LdlrP35951 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
LdlrP35951 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.62□□□□□ -0.39
LdlrP35951 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LdlrP35951 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LdlrP35951 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
LdlrP35951 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LdlrP35951 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.62□□□□□ -0.39
LdlrP35951 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
LdlrP35951 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LdlrP35951 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LdlrP35951 Gm24196-201ENSMUST00000179161 110 ntBASIC12.62□□□□□ -0.39
LdlrP35951 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LdlrP35951 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.62□□□□□ -0.39
LdlrP35951 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.62□□□□□ -0.39
LdlrP35951 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
LdlrP35951 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.62□□□□□ -0.39
LdlrP35951 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.62□□□□□ -0.39
LdlrP35951 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
LdlrP35951 Olfr582-201ENSMUST00000098212 960 ntBASIC12.62□□□□□ -0.39
LdlrP35951 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LdlrP35951 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LdlrP35951 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LdlrP35951 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
LdlrP35951 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LdlrP35951 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LdlrP35951 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LdlrP35951 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LdlrP35951 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LdlrP35951 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LdlrP35951 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
LdlrP35951 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LdlrP35951 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LdlrP35951 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LdlrP35951 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LdlrP35951 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms