Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nedd8P29595 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.68□□□□□ -0.54
Nedd8P29595 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nedd8P29595 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nedd8P29595 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Nedd8P29595 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nedd8P29595 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nedd8P29595 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nedd8P29595 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nedd8P29595 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nedd8P29595 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Nedd8P29595 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.68□□□□□ -0.54
Nedd8P29595 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nedd8P29595 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nedd8P29595 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Nedd8P29595 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nedd8P29595 Gm15393-201ENSMUST00000120499 219 ntBASIC11.68□□□□□ -0.54
Nedd8P29595 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC11.68□□□□□ -0.54
Nedd8P29595 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC11.68□□□□□ -0.54
Nedd8P29595 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nedd8P29595 Gm10766-202ENSMUST00000194123 606 ntBASIC11.68□□□□□ -0.54
Nedd8P29595 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC11.68□□□□□ -0.54
Nedd8P29595 Gm35960-201ENSMUST00000202712 767 ntBASIC11.68□□□□□ -0.54
Nedd8P29595 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.68□□□□□ -0.54
Nedd8P29595 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.68□□□□□ -0.54
Nedd8P29595 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nedd8P29595 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.68□□□□□ -0.54
Nedd8P29595 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nedd8P29595 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nedd8P29595 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Nedd8P29595 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nedd8P29595 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.68□□□□□ -0.54
Nedd8P29595 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nedd8P29595 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nedd8P29595 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nedd8P29595 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Nedd8P29595 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nedd8P29595 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nedd8P29595 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nedd8P29595 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.67□□□□□ -0.54
Nedd8P29595 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nedd8P29595 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nedd8P29595 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.67□□□□□ -0.54
Nedd8P29595 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nedd8P29595 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Nedd8P29595 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Nedd8P29595 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nedd8P29595 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Nedd8P29595 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Nedd8P29595 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nedd8P29595 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nedd8P29595 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nedd8P29595 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Nedd8P29595 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.67□□□□□ -0.54
Nedd8P29595 Gm9824-201ENSMUST00000178707 561 ntBASIC11.67□□□□□ -0.54
Nedd8P29595 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.67□□□□□ -0.54
Nedd8P29595 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC11.67□□□□□ -0.54
Nedd8P29595 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC11.67□□□□□ -0.54
Nedd8P29595 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC11.67□□□□□ -0.54
Nedd8P29595 Gm5425-201ENSMUST00000214125 459 ntBASIC11.67□□□□□ -0.54
Nedd8P29595 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nedd8P29595 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Nedd8P29595 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nedd8P29595 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nedd8P29595 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nedd8P29595 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Nedd8P29595 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nedd8P29595 Gm10819-201ENSMUST00000099988 561 ntBASIC11.67□□□□□ -0.54
Nedd8P29595 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nedd8P29595 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nedd8P29595 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nedd8P29595 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nedd8P29595 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nedd8P29595 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Nedd8P29595 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nedd8P29595 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nedd8P29595 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nedd8P29595 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nedd8P29595 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nedd8P29595 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nedd8P29595 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nedd8P29595 Nrn1-204ENSMUST00000224323 1779 ntBASIC11.67□□□□□ -0.54
Nedd8P29595 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nedd8P29595 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nedd8P29595 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nedd8P29595 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nedd8P29595 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Nedd8P29595 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.66□□□□□ -0.54
Nedd8P29595 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nedd8P29595 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nedd8P29595 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nedd8P29595 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nedd8P29595 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Nedd8P29595 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nedd8P29595 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nedd8P29595 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Nedd8P29595 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nedd8P29595 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nedd8P29595 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC11.66□□□□□ -0.54
Nedd8P29595 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms