Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Nckap1P28660 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nckap1P28660 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.65□□□□□ -0.38
Nckap1P28660 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nckap1P28660 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nckap1P28660 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nckap1P28660 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nckap1P28660 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nckap1P28660 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Nckap1P28660 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nckap1P28660 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nckap1P28660 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nckap1P28660 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nckap1P28660 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nckap1P28660 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nckap1P28660 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nckap1P28660 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.65□□□□□ -0.38
Nckap1P28660 Rubie-203ENSMUST00000227803 2430 ntBASIC12.65□□□□□ -0.38
Nckap1P28660 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nckap1P28660 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nckap1P28660 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nckap1P28660 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Nckap1P28660 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nckap1P28660 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nckap1P28660 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.65□□□□□ -0.38
Nckap1P28660 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nckap1P28660 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nckap1P28660 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nckap1P28660 Gm3096-201ENSMUST00000185770 364 ntBASIC12.65□□□□□ -0.38
Nckap1P28660 Gm18827-201ENSMUST00000188341 790 ntBASIC12.65□□□□□ -0.38
Nckap1P28660 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.65□□□□□ -0.38
Nckap1P28660 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.65□□□□□ -0.38
Nckap1P28660 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.65□□□□□ -0.38
Nckap1P28660 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nckap1P28660 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nckap1P28660 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nckap1P28660 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nckap1P28660 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Nckap1P28660 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nckap1P28660 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nckap1P28660 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nckap1P28660 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nckap1P28660 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nckap1P28660 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nckap1P28660 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nckap1P28660 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nckap1P28660 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Nckap1P28660 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nckap1P28660 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nckap1P28660 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nckap1P28660 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nckap1P28660 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nckap1P28660 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Nckap1P28660 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nckap1P28660 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Nckap1P28660 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nckap1P28660 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nckap1P28660 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nckap1P28660 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.64□□□□□ -0.39
Nckap1P28660 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nckap1P28660 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.64□□□□□ -0.39
Nckap1P28660 Gm13875-201ENSMUST00000120162 282 ntBASIC12.64□□□□□ -0.39
Nckap1P28660 Gm12997-201ENSMUST00000120207 640 ntBASIC12.64□□□□□ -0.39
Nckap1P28660 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.64□□□□□ -0.39
Nckap1P28660 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nckap1P28660 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Nckap1P28660 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.64□□□□□ -0.39
Nckap1P28660 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nckap1P28660 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.64□□□□□ -0.39
Nckap1P28660 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.64□□□□□ -0.39
Nckap1P28660 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nckap1P28660 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nckap1P28660 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nckap1P28660 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nckap1P28660 Grk6-205ENSMUST00000224653 2976 ntBASIC12.64□□□□□ -0.39
Nckap1P28660 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nckap1P28660 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.64□□□□□ -0.39
Nckap1P28660 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nckap1P28660 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nckap1P28660 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Nckap1P28660 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.64□□□□□ -0.39
Nckap1P28660 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.64□□□□□ -0.39
Nckap1P28660 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nckap1P28660 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nckap1P28660 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nckap1P28660 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Nckap1P28660 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nckap1P28660 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nckap1P28660 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nckap1P28660 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Nckap1P28660 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nckap1P28660 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nckap1P28660 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nckap1P28660 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nckap1P28660 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.63□□□□□ -0.39
Nckap1P28660 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nckap1P28660 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nckap1P28660 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nckap1P28660 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nckap1P28660 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms