Protein–RNA interactions for Protein: P27790

Cenpb, Major centromere autoantigen B, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CenpbP27790 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CenpbP27790 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC17.07■□□□□ 0.32
CenpbP27790 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CenpbP27790 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CenpbP27790 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
CenpbP27790 Gm5053-201ENSMUST00000208361 1678 ntBASIC17.07■□□□□ 0.32
CenpbP27790 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CenpbP27790 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CenpbP27790 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CenpbP27790 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CenpbP27790 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CenpbP27790 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CenpbP27790 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CenpbP27790 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CenpbP27790 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CenpbP27790 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CenpbP27790 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC17.07■□□□□ 0.32
CenpbP27790 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CenpbP27790 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.07■□□□□ 0.32
CenpbP27790 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CenpbP27790 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CenpbP27790 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CenpbP27790 AC107453.4-201ENSMUST00000227068 1817 ntBASIC17.07■□□□□ 0.32
CenpbP27790 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CenpbP27790 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CenpbP27790 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CenpbP27790 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CenpbP27790 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CenpbP27790 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CenpbP27790 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CenpbP27790 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CenpbP27790 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CenpbP27790 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CenpbP27790 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CenpbP27790 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CenpbP27790 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CenpbP27790 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CenpbP27790 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CenpbP27790 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CenpbP27790 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CenpbP27790 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CenpbP27790 Gm26308-201ENSMUST00000157768 69 ntBASIC17.06■□□□□ 0.32
CenpbP27790 Gm5479-201ENSMUST00000160578 435 ntBASIC17.06■□□□□ 0.32
CenpbP27790 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
CenpbP27790 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.06■□□□□ 0.32
CenpbP27790 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.06■□□□□ 0.32
CenpbP27790 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC17.06■□□□□ 0.32
CenpbP27790 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CenpbP27790 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CenpbP27790 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CenpbP27790 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CenpbP27790 Gm44942-201ENSMUST00000096093 2072 ntBASIC17.06■□□□□ 0.32
CenpbP27790 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC17.06■□□□□ 0.32
CenpbP27790 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC17.06■□□□□ 0.32
CenpbP27790 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CenpbP27790 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CenpbP27790 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CenpbP27790 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CenpbP27790 AC121870.2-201ENSMUST00000214343 1870 ntBASIC17.05■□□□□ 0.32
CenpbP27790 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CenpbP27790 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CenpbP27790 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC17.05■□□□□ 0.32
CenpbP27790 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CenpbP27790 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CenpbP27790 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CenpbP27790 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CenpbP27790 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CenpbP27790 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CenpbP27790 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CenpbP27790 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.05■□□□□ 0.32
CenpbP27790 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17.05■□□□□ 0.32
CenpbP27790 Mir6990-201ENSMUST00000183724 91 ntBASIC17.05■□□□□ 0.32
CenpbP27790 Gm45098-201ENSMUST00000207179 657 ntBASIC17.05■□□□□ 0.32
CenpbP27790 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CenpbP27790 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CenpbP27790 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC17.05■□□□□ 0.32
CenpbP27790 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CenpbP27790 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CenpbP27790 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CenpbP27790 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CenpbP27790 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CenpbP27790 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CenpbP27790 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CenpbP27790 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CenpbP27790 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CenpbP27790 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CenpbP27790 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CenpbP27790 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CenpbP27790 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CenpbP27790 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CenpbP27790 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CenpbP27790 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CenpbP27790 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
CenpbP27790 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CenpbP27790 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CenpbP27790 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC17.04■□□□□ 0.32
CenpbP27790 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CenpbP27790 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CenpbP27790 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CenpbP27790 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms