Protein–RNA interactions for Protein: P22605

Rarb, Retinoic acid receptor beta, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RarbP22605 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RarbP22605 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RarbP22605 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RarbP22605 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RarbP22605 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RarbP22605 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RarbP22605 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RarbP22605 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
RarbP22605 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RarbP22605 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RarbP22605 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RarbP22605 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RarbP22605 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RarbP22605 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
RarbP22605 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RarbP22605 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RarbP22605 Gm12015-201ENSMUST00000117065 843 ntBASIC14.04□□□□□ -0.16
RarbP22605 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RarbP22605 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RarbP22605 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RarbP22605 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
RarbP22605 Mir7032-201ENSMUST00000185154 79 ntBASIC14.04□□□□□ -0.16
RarbP22605 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC14.04□□□□□ -0.16
RarbP22605 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC14.04□□□□□ -0.16
RarbP22605 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC14.04□□□□□ -0.16
RarbP22605 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RarbP22605 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RarbP22605 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RarbP22605 Gm10702-201ENSMUST00000098929 1268 ntBASIC14.04□□□□□ -0.16
RarbP22605 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RarbP22605 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RarbP22605 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RarbP22605 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RarbP22605 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RarbP22605 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RarbP22605 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RarbP22605 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RarbP22605 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
RarbP22605 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RarbP22605 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RarbP22605 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RarbP22605 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RarbP22605 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RarbP22605 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RarbP22605 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RarbP22605 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
RarbP22605 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
RarbP22605 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
RarbP22605 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RarbP22605 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RarbP22605 Gm16296-201ENSMUST00000159905 325 ntBASIC14.03□□□□□ -0.16
RarbP22605 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RarbP22605 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RarbP22605 Gm28882-201ENSMUST00000185504 314 ntBASIC14.03□□□□□ -0.16
RarbP22605 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC14.03□□□□□ -0.16
RarbP22605 Gm45598-202ENSMUST00000210719 986 ntBASIC14.03□□□□□ -0.16
RarbP22605 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC14.03□□□□□ -0.16
RarbP22605 Spcs1-203ENSMUST00000226374 592 ntBASIC14.03□□□□□ -0.16
RarbP22605 AC131330.1-201ENSMUST00000227814 1015 ntBASIC14.03□□□□□ -0.16
RarbP22605 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RarbP22605 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
RarbP22605 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.03□□□□□ -0.16
RarbP22605 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC14.03□□□□□ -0.16
RarbP22605 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RarbP22605 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
RarbP22605 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.03□□□□□ -0.16
RarbP22605 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RarbP22605 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.03□□□□□ -0.16
RarbP22605 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RarbP22605 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
RarbP22605 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
RarbP22605 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
RarbP22605 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
RarbP22605 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
RarbP22605 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RarbP22605 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RarbP22605 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RarbP22605 AC122197.2-201ENSMUST00000219196 1635 ntBASIC14.02□□□□□ -0.16
RarbP22605 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RarbP22605 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RarbP22605 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RarbP22605 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
RarbP22605 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
RarbP22605 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RarbP22605 Gm15782-201ENSMUST00000121073 445 ntBASIC14.02□□□□□ -0.17
RarbP22605 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RarbP22605 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC14.02□□□□□ -0.17
RarbP22605 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
RarbP22605 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC14.02□□□□□ -0.17
RarbP22605 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC14.02□□□□□ -0.17
RarbP22605 Gm37835-201ENSMUST00000193305 361 ntBASIC14.02□□□□□ -0.17
RarbP22605 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC14.02□□□□□ -0.17
RarbP22605 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RarbP22605 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC14.02□□□□□ -0.17
RarbP22605 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC14.02□□□□□ -0.17
RarbP22605 AC165260.3-202ENSMUST00000224550 1031 ntBASIC14.02□□□□□ -0.17
RarbP22605 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
RarbP22605 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RarbP22605 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RarbP22605 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms