Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.19□□□□□ -0.46
BdnfP21237 Itm2b-204ENSMUST00000228637 783 ntBASIC12.19□□□□□ -0.46
BdnfP21237 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
BdnfP21237 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
BdnfP21237 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
BdnfP21237 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
BdnfP21237 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
BdnfP21237 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
BdnfP21237 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
BdnfP21237 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
BdnfP21237 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
BdnfP21237 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
BdnfP21237 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
BdnfP21237 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
BdnfP21237 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
BdnfP21237 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
BdnfP21237 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
BdnfP21237 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.19□□□□□ -0.46
BdnfP21237 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
BdnfP21237 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
BdnfP21237 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
BdnfP21237 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
BdnfP21237 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
BdnfP21237 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
BdnfP21237 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.18□□□□□ -0.46
BdnfP21237 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
BdnfP21237 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
BdnfP21237 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
BdnfP21237 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
BdnfP21237 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
BdnfP21237 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
BdnfP21237 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
BdnfP21237 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.18□□□□□ -0.46
BdnfP21237 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
BdnfP21237 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
BdnfP21237 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
BdnfP21237 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
BdnfP21237 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
BdnfP21237 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.18□□□□□ -0.46
BdnfP21237 Gm14350-201ENSMUST00000116642 640 ntBASIC12.18□□□□□ -0.46
BdnfP21237 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
BdnfP21237 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.18□□□□□ -0.46
BdnfP21237 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.18□□□□□ -0.46
BdnfP21237 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.18□□□□□ -0.46
BdnfP21237 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.18□□□□□ -0.46
BdnfP21237 Gm5866-201ENSMUST00000177881 973 ntBASIC12.18□□□□□ -0.46
BdnfP21237 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.18□□□□□ -0.46
BdnfP21237 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
BdnfP21237 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
BdnfP21237 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
BdnfP21237 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
BdnfP21237 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
BdnfP21237 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
BdnfP21237 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
BdnfP21237 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
BdnfP21237 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.18□□□□□ -0.46
BdnfP21237 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
BdnfP21237 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
BdnfP21237 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
BdnfP21237 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.17□□□□□ -0.46
BdnfP21237 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
BdnfP21237 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
BdnfP21237 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
BdnfP21237 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
BdnfP21237 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
BdnfP21237 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
BdnfP21237 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
BdnfP21237 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
BdnfP21237 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
BdnfP21237 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
BdnfP21237 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.17□□□□□ -0.46
BdnfP21237 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
BdnfP21237 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
BdnfP21237 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.17□□□□□ -0.46
BdnfP21237 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.17□□□□□ -0.46
BdnfP21237 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.17□□□□□ -0.46
BdnfP21237 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.17□□□□□ -0.46
BdnfP21237 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.17□□□□□ -0.46
BdnfP21237 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.17□□□□□ -0.46
BdnfP21237 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
BdnfP21237 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
BdnfP21237 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.17□□□□□ -0.46
BdnfP21237 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
BdnfP21237 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
BdnfP21237 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
BdnfP21237 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
BdnfP21237 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
BdnfP21237 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
BdnfP21237 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
BdnfP21237 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
BdnfP21237 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
BdnfP21237 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.17□□□□□ -0.46
BdnfP21237 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
BdnfP21237 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
BdnfP21237 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
BdnfP21237 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
BdnfP21237 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
BdnfP21237 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
BdnfP21237 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
BdnfP21237 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms