Protein–RNA interactions for Protein: P20664

Prim1, DNA primase small subunit, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prim1P20664 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prim1P20664 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prim1P20664 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Prim1P20664 Gm15547-201ENSMUST00000122152 333 ntBASIC16.22■□□□□ 0.19
Prim1P20664 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Prim1P20664 Gm13570-201ENSMUST00000140763 309 ntBASIC16.22■□□□□ 0.19
Prim1P20664 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Prim1P20664 Gm5656-201ENSMUST00000171020 1096 ntBASIC16.22■□□□□ 0.19
Prim1P20664 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Prim1P20664 Gm36982-201ENSMUST00000193796 1128 ntBASIC16.22■□□□□ 0.19
Prim1P20664 Gm5869-201ENSMUST00000200248 1257 ntBASIC16.22■□□□□ 0.19
Prim1P20664 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC16.22■□□□□ 0.19
Prim1P20664 AC153512.2-201ENSMUST00000220363 1273 ntTSL 5 BASIC16.22■□□□□ 0.19
Prim1P20664 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC16.22■□□□□ 0.19
Prim1P20664 AC160962.2-201ENSMUST00000224761 632 ntBASIC16.22■□□□□ 0.19
Prim1P20664 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prim1P20664 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Prim1P20664 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Prim1P20664 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prim1P20664 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prim1P20664 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prim1P20664 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prim1P20664 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prim1P20664 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Prim1P20664 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prim1P20664 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prim1P20664 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prim1P20664 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Prim1P20664 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Prim1P20664 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Prim1P20664 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Prim1P20664 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prim1P20664 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prim1P20664 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC16.21■□□□□ 0.19
Prim1P20664 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prim1P20664 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC16.21■□□□□ 0.19
Prim1P20664 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Prim1P20664 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Prim1P20664 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC16.21■□□□□ 0.19
Prim1P20664 Gm14999-201ENSMUST00000121039 624 ntBASIC16.21■□□□□ 0.19
Prim1P20664 Gm5863-201ENSMUST00000121760 1008 ntBASIC16.21■□□□□ 0.19
Prim1P20664 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Prim1P20664 Gm16112-201ENSMUST00000159075 382 ntBASIC16.21■□□□□ 0.19
Prim1P20664 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Prim1P20664 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Prim1P20664 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC16.21■□□□□ 0.19
Prim1P20664 Gm45072-201ENSMUST00000208673 929 ntBASIC16.21■□□□□ 0.19
Prim1P20664 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Prim1P20664 Gm25131-201ENSMUST00000082653 151 ntBASIC16.21■□□□□ 0.19
Prim1P20664 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Prim1P20664 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Prim1P20664 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prim1P20664 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prim1P20664 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Prim1P20664 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prim1P20664 Gm10782-202ENSMUST00000223775 1480 ntBASIC16.21■□□□□ 0.19
Prim1P20664 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Prim1P20664 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Prim1P20664 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Prim1P20664 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Prim1P20664 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prim1P20664 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Prim1P20664 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC16.2■□□□□ 0.18
Prim1P20664 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prim1P20664 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Prim1P20664 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Prim1P20664 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Prim1P20664 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prim1P20664 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prim1P20664 Gm9440-201ENSMUST00000119667 539 ntBASIC16.2■□□□□ 0.18
Prim1P20664 Gm15703-201ENSMUST00000120250 880 ntBASIC16.2■□□□□ 0.18
Prim1P20664 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Prim1P20664 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Prim1P20664 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prim1P20664 Gm18827-201ENSMUST00000188341 790 ntBASIC16.2■□□□□ 0.18
Prim1P20664 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Prim1P20664 Gm37466-201ENSMUST00000195692 652 ntBASIC16.2■□□□□ 0.18
Prim1P20664 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prim1P20664 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prim1P20664 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC16.2■□□□□ 0.18
Prim1P20664 CT010480.1-201ENSMUST00000223612 363 ntBASIC16.2■□□□□ 0.18
Prim1P20664 Mir433-201ENSMUST00000093564 124 ntBASIC16.2■□□□□ 0.18
Prim1P20664 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC16.2■□□□□ 0.18
Prim1P20664 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prim1P20664 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Prim1P20664 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Prim1P20664 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prim1P20664 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prim1P20664 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prim1P20664 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prim1P20664 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Prim1P20664 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Prim1P20664 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prim1P20664 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prim1P20664 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prim1P20664 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC16.19■□□□□ 0.18
Prim1P20664 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prim1P20664 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prim1P20664 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prim1P20664 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms