Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Msx1P13297 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Msx1P13297 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Msx1P13297 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Msx1P13297 Gm13615-201ENSMUST00000120242 1612 ntBASIC12.19□□□□□ -0.46
Msx1P13297 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Msx1P13297 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.18□□□□□ -0.46
Msx1P13297 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Msx1P13297 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.18□□□□□ -0.46
Msx1P13297 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.18□□□□□ -0.46
Msx1P13297 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Msx1P13297 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Msx1P13297 Gm12176-201ENSMUST00000121420 875 ntBASIC12.18□□□□□ -0.46
Msx1P13297 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.18□□□□□ -0.46
Msx1P13297 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Msx1P13297 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Msx1P13297 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Msx1P13297 Gm38158-201ENSMUST00000194617 339 ntBASIC12.18□□□□□ -0.46
Msx1P13297 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.18□□□□□ -0.46
Msx1P13297 Gm21769-201ENSMUST00000211922 111 ntBASIC12.18□□□□□ -0.46
Msx1P13297 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.18□□□□□ -0.46
Msx1P13297 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Msx1P13297 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Msx1P13297 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Msx1P13297 Ift43-201ENSMUST00000054565 773 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Msx1P13297 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Msx1P13297 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.18□□□□□ -0.46
Msx1P13297 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Msx1P13297 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.18□□□□□ -0.46
Msx1P13297 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Msx1P13297 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Msx1P13297 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Msx1P13297 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.18□□□□□ -0.46
Msx1P13297 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Msx1P13297 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Msx1P13297 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Msx1P13297 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Msx1P13297 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
Msx1P13297 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.18□□□□□ -0.46
Msx1P13297 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.18□□□□□ -0.46
Msx1P13297 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
Msx1P13297 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Msx1P13297 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msx1P13297 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.17□□□□□ -0.46
Msx1P13297 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msx1P13297 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msx1P13297 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.17□□□□□ -0.46
Msx1P13297 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msx1P13297 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Msx1P13297 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Msx1P13297 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msx1P13297 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Msx1P13297 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msx1P13297 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msx1P13297 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msx1P13297 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msx1P13297 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msx1P13297 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msx1P13297 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msx1P13297 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.17□□□□□ -0.46
Msx1P13297 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msx1P13297 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msx1P13297 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msx1P13297 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.17□□□□□ -0.46
Msx1P13297 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Msx1P13297 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Msx1P13297 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msx1P13297 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.17□□□□□ -0.46
Msx1P13297 Gm6222-202ENSMUST00000182143 629 ntBASIC12.17□□□□□ -0.46
Msx1P13297 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Msx1P13297 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msx1P13297 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msx1P13297 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Msx1P13297 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.17□□□□□ -0.46
Msx1P13297 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Msx1P13297 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msx1P13297 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msx1P13297 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msx1P13297 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msx1P13297 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.17□□□□□ -0.46
Msx1P13297 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.17□□□□□ -0.46
Msx1P13297 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msx1P13297 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.17□□□□□ -0.46
Msx1P13297 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msx1P13297 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Msx1P13297 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Msx1P13297 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msx1P13297 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Msx1P13297 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Msx1P13297 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Msx1P13297 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msx1P13297 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.16□□□□□ -0.46
Msx1P13297 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msx1P13297 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msx1P13297 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msx1P13297 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Msx1P13297 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msx1P13297 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Msx1P13297 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Msx1P13297 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms