Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cxcl1P12850 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Cxcl1P12850 Gm18227-201ENSMUST00000211082 1468 ntBASIC10.49□□□□□ -0.73
Cxcl1P12850 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.48□□□□□ -0.73
Cxcl1P12850 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl1P12850 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl1P12850 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl1P12850 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl1P12850 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl1P12850 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl1P12850 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC10.48□□□□□ -0.73
Cxcl1P12850 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl1P12850 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl1P12850 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.48□□□□□ -0.73
Cxcl1P12850 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl1P12850 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl1P12850 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
Cxcl1P12850 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl1P12850 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl1P12850 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.48□□□□□ -0.73
Cxcl1P12850 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl1P12850 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl1P12850 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
Cxcl1P12850 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
Cxcl1P12850 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
Cxcl1P12850 Gm13394-201ENSMUST00000121658 1000 ntBASIC10.48□□□□□ -0.73
Cxcl1P12850 Gm14760-201ENSMUST00000121831 999 ntBASIC10.48□□□□□ -0.73
Cxcl1P12850 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl1P12850 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl1P12850 Gm15429-201ENSMUST00000151268 798 ntBASIC10.48□□□□□ -0.73
Cxcl1P12850 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC10.48□□□□□ -0.73
Cxcl1P12850 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC10.48□□□□□ -0.73
Cxcl1P12850 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC10.48□□□□□ -0.73
Cxcl1P12850 Gm43416-201ENSMUST00000201916 1015 ntBASIC10.48□□□□□ -0.73
Cxcl1P12850 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC10.48□□□□□ -0.73
Cxcl1P12850 Gm18473-201ENSMUST00000220543 868 ntBASIC10.48□□□□□ -0.73
Cxcl1P12850 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl1P12850 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl1P12850 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Cxcl1P12850 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC10.48□□□□□ -0.73
Cxcl1P12850 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl1P12850 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl1P12850 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC10.48□□□□□ -0.73
Cxcl1P12850 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
Cxcl1P12850 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl1P12850 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl1P12850 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Cxcl1P12850 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl1P12850 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC10.48□□□□□ -0.73
Cxcl1P12850 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl1P12850 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl1P12850 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl1P12850 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC10.48□□□□□ -0.73
Cxcl1P12850 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl1P12850 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cxcl1P12850 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cxcl1P12850 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
Cxcl1P12850 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cxcl1P12850 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cxcl1P12850 CT009713.10-201ENSMUST00000225013 1986 ntBASIC10.47□□□□□ -0.73
Cxcl1P12850 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cxcl1P12850 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC10.47□□□□□ -0.73
Cxcl1P12850 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.47□□□□□ -0.73
Cxcl1P12850 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cxcl1P12850 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Cxcl1P12850 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
Cxcl1P12850 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cxcl1P12850 Mir7654-201ENSMUST00000185082 70 ntBASIC10.47□□□□□ -0.73
Cxcl1P12850 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC10.47□□□□□ -0.73
Cxcl1P12850 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cxcl1P12850 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC10.47□□□□□ -0.73
Cxcl1P12850 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Cxcl1P12850 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cxcl1P12850 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cxcl1P12850 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cxcl1P12850 Gm3365-201ENSMUST00000216296 1480 ntBASIC10.47□□□□□ -0.73
Cxcl1P12850 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cxcl1P12850 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cxcl1P12850 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cxcl1P12850 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Cxcl1P12850 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cxcl1P12850 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cxcl1P12850 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cxcl1P12850 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cxcl1P12850 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cxcl1P12850 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cxcl1P12850 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cxcl1P12850 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC10.47□□□□□ -0.73
Cxcl1P12850 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Cxcl1P12850 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Cxcl1P12850 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cxcl1P12850 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cxcl1P12850 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cxcl1P12850 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC10.46□□□□□ -0.73
Cxcl1P12850 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cxcl1P12850 Rubie-203ENSMUST00000227803 2430 ntBASIC10.46□□□□□ -0.73
Cxcl1P12850 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Cxcl1P12850 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC10.46□□□□□ -0.73
Cxcl1P12850 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Cxcl1P12850 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms