Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hoxc9P09633 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hoxc9P09633 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Hoxc9P09633 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
Hoxc9P09633 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Hoxc9P09633 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Hoxc9P09633 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hoxc9P09633 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC16.33■□□□□ 0.2
Hoxc9P09633 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
Hoxc9P09633 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Hoxc9P09633 Gm18038-201ENSMUST00000197900 485 ntBASIC16.33■□□□□ 0.2
Hoxc9P09633 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC16.33■□□□□ 0.2
Hoxc9P09633 AC159819.2-201ENSMUST00000216151 342 ntBASIC16.33■□□□□ 0.2
Hoxc9P09633 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC16.33■□□□□ 0.2
Hoxc9P09633 Ntng1-201ENSMUST00000051253 327 ntBASIC16.33■□□□□ 0.2
Hoxc9P09633 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC16.33■□□□□ 0.2
Hoxc9P09633 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC16.33■□□□□ 0.2
Hoxc9P09633 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hoxc9P09633 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hoxc9P09633 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC16.33■□□□□ 0.2
Hoxc9P09633 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC16.33■□□□□ 0.2
Hoxc9P09633 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hoxc9P09633 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Hoxc9P09633 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
Hoxc9P09633 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hoxc9P09633 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Hoxc9P09633 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxc9P09633 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxc9P09633 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxc9P09633 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxc9P09633 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxc9P09633 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxc9P09633 Gm14058-201ENSMUST00000116082 735 ntBASIC16.32■□□□□ 0.2
Hoxc9P09633 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC16.32■□□□□ 0.2
Hoxc9P09633 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC16.32■□□□□ 0.2
Hoxc9P09633 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxc9P09633 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Hoxc9P09633 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxc9P09633 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC16.32■□□□□ 0.2
Hoxc9P09633 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Hoxc9P09633 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxc9P09633 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC16.32■□□□□ 0.2
Hoxc9P09633 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC16.32■□□□□ 0.2
Hoxc9P09633 Gm43045-201ENSMUST00000198725 2095 ntBASIC16.32■□□□□ 0.2
Hoxc9P09633 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxc9P09633 Gm42840-201ENSMUST00000200303 2251 ntBASIC16.32■□□□□ 0.2
Hoxc9P09633 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC16.32■□□□□ 0.2
Hoxc9P09633 Gm17827-201ENSMUST00000211825 742 ntBASIC16.32■□□□□ 0.2
Hoxc9P09633 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxc9P09633 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxc9P09633 Gm270-201ENSMUST00000223010 976 ntBASIC16.32■□□□□ 0.2
Hoxc9P09633 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Hoxc9P09633 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxc9P09633 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Hoxc9P09633 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxc9P09633 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxc9P09633 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Hoxc9P09633 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxc9P09633 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxc9P09633 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxc9P09633 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Hoxc9P09633 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxc9P09633 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Hoxc9P09633 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxc9P09633 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxc9P09633 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxc9P09633 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxc9P09633 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxc9P09633 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
Hoxc9P09633 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxc9P09633 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxc9P09633 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC16.31■□□□□ 0.2
Hoxc9P09633 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC16.31■□□□□ 0.2
Hoxc9P09633 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Hoxc9P09633 Mir7032-201ENSMUST00000185154 79 ntBASIC16.31■□□□□ 0.2
Hoxc9P09633 Gm5051-201ENSMUST00000204085 485 ntBASIC16.31■□□□□ 0.2
Hoxc9P09633 Olfr1347-205ENSMUST00000220413 964 ntBASIC16.31■□□□□ 0.2
Hoxc9P09633 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Hoxc9P09633 Gm5455-201ENSMUST00000058710 715 ntBASIC16.31■□□□□ 0.2
Hoxc9P09633 Mir219a-1-201ENSMUST00000083621 110 ntBASIC16.31■□□□□ 0.2
Hoxc9P09633 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Hoxc9P09633 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Hoxc9P09633 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxc9P09633 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxc9P09633 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxc9P09633 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC16.31■□□□□ 0.2
Hoxc9P09633 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxc9P09633 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Hoxc9P09633 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Hoxc9P09633 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxc9P09633 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC16.31■□□□□ 0.2
Hoxc9P09633 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxc9P09633 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxc9P09633 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxc9P09633 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxc9P09633 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Hoxc9P09633 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC16.3■□□□□ 0.2
Hoxc9P09633 Gm42863-201ENSMUST00000197875 2958 ntBASIC16.3■□□□□ 0.2
Hoxc9P09633 Grk6-205ENSMUST00000224653 2976 ntBASIC16.3■□□□□ 0.2
Hoxc9P09633 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 101.3 ms