Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
PdgfrbP05622 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
PdgfrbP05622 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
PdgfrbP05622 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
PdgfrbP05622 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PdgfrbP05622 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
PdgfrbP05622 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
PdgfrbP05622 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.84□□□□□ -0.35
PdgfrbP05622 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
PdgfrbP05622 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PdgfrbP05622 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
PdgfrbP05622 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
PdgfrbP05622 Gm11425-201ENSMUST00000119608 498 ntBASIC12.84□□□□□ -0.35
PdgfrbP05622 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
PdgfrbP05622 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
PdgfrbP05622 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.84□□□□□ -0.35
PdgfrbP05622 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
PdgfrbP05622 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC12.84□□□□□ -0.35
PdgfrbP05622 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
PdgfrbP05622 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.84□□□□□ -0.35
PdgfrbP05622 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PdgfrbP05622 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
PdgfrbP05622 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PdgfrbP05622 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PdgfrbP05622 Gm9396-201ENSMUST00000076703 567 ntBASIC12.84□□□□□ -0.35
PdgfrbP05622 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
PdgfrbP05622 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
PdgfrbP05622 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
PdgfrbP05622 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
PdgfrbP05622 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
PdgfrbP05622 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
PdgfrbP05622 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
PdgfrbP05622 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
PdgfrbP05622 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
PdgfrbP05622 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC12.84□□□□□ -0.35
PdgfrbP05622 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PdgfrbP05622 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.84□□□□□ -0.35
PdgfrbP05622 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.84□□□□□ -0.35
PdgfrbP05622 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PdgfrbP05622 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
PdgfrbP05622 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
PdgfrbP05622 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PdgfrbP05622 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
PdgfrbP05622 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.83□□□□□ -0.35
PdgfrbP05622 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
PdgfrbP05622 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
PdgfrbP05622 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PdgfrbP05622 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
PdgfrbP05622 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PdgfrbP05622 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
PdgfrbP05622 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
PdgfrbP05622 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
PdgfrbP05622 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
PdgfrbP05622 Gm13226-201ENSMUST00000117838 404 ntBASIC12.83□□□□□ -0.36
PdgfrbP05622 Gm14660-201ENSMUST00000119809 575 ntBASIC12.83□□□□□ -0.36
PdgfrbP05622 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
PdgfrbP05622 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.83□□□□□ -0.36
PdgfrbP05622 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
PdgfrbP05622 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.83□□□□□ -0.36
PdgfrbP05622 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.83□□□□□ -0.36
PdgfrbP05622 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
PdgfrbP05622 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
PdgfrbP05622 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
PdgfrbP05622 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.83□□□□□ -0.36
PdgfrbP05622 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PdgfrbP05622 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
PdgfrbP05622 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PdgfrbP05622 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
PdgfrbP05622 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PdgfrbP05622 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
PdgfrbP05622 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
PdgfrbP05622 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PdgfrbP05622 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PdgfrbP05622 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC12.83□□□□□ -0.36
PdgfrbP05622 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PdgfrbP05622 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.83□□□□□ -0.36
PdgfrbP05622 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
PdgfrbP05622 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
PdgfrbP05622 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
PdgfrbP05622 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
PdgfrbP05622 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
PdgfrbP05622 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PdgfrbP05622 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
PdgfrbP05622 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.82□□□□□ -0.36
PdgfrbP05622 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
PdgfrbP05622 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.82□□□□□ -0.36
PdgfrbP05622 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PdgfrbP05622 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
PdgfrbP05622 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
PdgfrbP05622 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PdgfrbP05622 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PdgfrbP05622 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PdgfrbP05622 Gm12384-201ENSMUST00000119228 919 ntBASIC12.82□□□□□ -0.36
PdgfrbP05622 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PdgfrbP05622 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PdgfrbP05622 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
PdgfrbP05622 Gm45574-201ENSMUST00000210921 331 ntBASIC12.82□□□□□ -0.36
PdgfrbP05622 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.82□□□□□ -0.36
PdgfrbP05622 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.82□□□□□ -0.36
PdgfrbP05622 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms