Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC11.15□□□□□ -0.62
P04224 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
P04224 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
P04224 Gm27772-201ENSMUST00000184900 187 ntBASIC11.15□□□□□ -0.62
P04224 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC11.15□□□□□ -0.62
P04224 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
P04224 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC11.15□□□□□ -0.62
P04224 Gm18905-201ENSMUST00000205454 928 ntBASIC11.15□□□□□ -0.62
P04224 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
P04224 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC11.15□□□□□ -0.62
P04224 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC11.15□□□□□ -0.62
P04224 AC154846.1-201ENSMUST00000226278 862 ntBASIC11.15□□□□□ -0.62
P04224 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
P04224 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
P04224 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
P04224 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
P04224 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
P04224 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
P04224 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
P04224 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
P04224 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
P04224 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
P04224 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
P04224 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
P04224 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
P04224 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
P04224 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
P04224 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
P04224 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
P04224 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
P04224 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
P04224 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.14□□□□□ -0.63
P04224 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.14□□□□□ -0.63
P04224 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
P04224 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.14□□□□□ -0.63
P04224 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
P04224 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
P04224 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
P04224 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.14□□□□□ -0.63
P04224 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC11.14□□□□□ -0.63
P04224 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
P04224 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
P04224 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
P04224 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
P04224 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
P04224 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
P04224 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC11.14□□□□□ -0.63
P04224 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC11.14□□□□□ -0.63
P04224 Cd63-ps-201ENSMUST00000145417 875 ntBASIC11.14□□□□□ -0.63
P04224 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
P04224 Gm38294-201ENSMUST00000192831 381 ntBASIC11.14□□□□□ -0.63
P04224 Gm43703-201ENSMUST00000200523 763 ntBASIC11.14□□□□□ -0.63
P04224 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC11.14□□□□□ -0.63
P04224 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
P04224 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC11.14□□□□□ -0.63
P04224 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
P04224 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC11.14□□□□□ -0.63
P04224 Gm6888-201ENSMUST00000221983 706 ntBASIC11.14□□□□□ -0.63
P04224 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
P04224 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
P04224 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
P04224 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
P04224 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
P04224 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
P04224 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
P04224 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
P04224 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
P04224 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
P04224 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.14□□□□□ -0.63
P04224 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
P04224 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
P04224 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
P04224 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
P04224 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
P04224 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.14□□□□□ -0.63
P04224 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
P04224 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
P04224 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
P04224 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
P04224 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
P04224 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
P04224 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
P04224 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P04224 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
P04224 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
P04224 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P04224 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
P04224 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
P04224 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
P04224 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P04224 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P04224 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
P04224 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
P04224 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
P04224 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC11.13□□□□□ -0.63
P04224 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P04224 Gm14701-201ENSMUST00000117156 348 ntBASIC11.13□□□□□ -0.63
P04224 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.13□□□□□ -0.63
P04224 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC11.13□□□□□ -0.63
P04224 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms