Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hoxa3P02831 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hoxa3P02831 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Hoxa3P02831 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Hoxa3P02831 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hoxa3P02831 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC10.65□□□□□ -0.7
Hoxa3P02831 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hoxa3P02831 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hoxa3P02831 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hoxa3P02831 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hoxa3P02831 Gm44891-201ENSMUST00000208817 2223 ntBASIC10.65□□□□□ -0.7
Hoxa3P02831 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hoxa3P02831 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hoxa3P02831 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hoxa3P02831 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hoxa3P02831 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hoxa3P02831 Gm15370-201ENSMUST00000117158 253 ntBASIC10.65□□□□□ -0.7
Hoxa3P02831 Gm24548-201ENSMUST00000158650 108 ntBASIC10.65□□□□□ -0.7
Hoxa3P02831 Gm22121-201ENSMUST00000175148 54 ntBASIC10.65□□□□□ -0.7
Hoxa3P02831 Gm6621-201ENSMUST00000193251 772 ntBASIC10.65□□□□□ -0.7
Hoxa3P02831 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC10.65□□□□□ -0.7
Hoxa3P02831 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC10.65□□□□□ -0.7
Hoxa3P02831 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Hoxa3P02831 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC10.65□□□□□ -0.7
Hoxa3P02831 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC10.65□□□□□ -0.7
Hoxa3P02831 Gm7046-201ENSMUST00000221351 977 ntBASIC10.65□□□□□ -0.7
Hoxa3P02831 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hoxa3P02831 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Hoxa3P02831 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Hoxa3P02831 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Hoxa3P02831 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hoxa3P02831 Gm15897-201ENSMUST00000117770 1486 ntBASIC10.65□□□□□ -0.7
Hoxa3P02831 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hoxa3P02831 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC10.65□□□□□ -0.7
Hoxa3P02831 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Hoxa3P02831 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hoxa3P02831 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hoxa3P02831 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Hoxa3P02831 Gm5939-201ENSMUST00000119613 2874 ntBASIC10.65□□□□□ -0.7
Hoxa3P02831 Gm43463-201ENSMUST00000195967 1803 ntBASIC10.65□□□□□ -0.71
Hoxa3P02831 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Hoxa3P02831 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC10.65□□□□□ -0.71
Hoxa3P02831 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
Hoxa3P02831 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
Hoxa3P02831 Gm20633-201ENSMUST00000176742 2831 ntBASIC10.65□□□□□ -0.71
Hoxa3P02831 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Hoxa3P02831 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Hoxa3P02831 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC10.65□□□□□ -0.71
Hoxa3P02831 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
Hoxa3P02831 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Hoxa3P02831 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Hoxa3P02831 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
Hoxa3P02831 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC10.65□□□□□ -0.71
Hoxa3P02831 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.71
Hoxa3P02831 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hoxa3P02831 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Hoxa3P02831 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Hoxa3P02831 Gm7049-201ENSMUST00000223520 1712 ntBASIC10.64□□□□□ -0.71
Hoxa3P02831 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hoxa3P02831 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hoxa3P02831 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hoxa3P02831 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hoxa3P02831 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
Hoxa3P02831 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Hoxa3P02831 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Hoxa3P02831 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hoxa3P02831 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Hoxa3P02831 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC10.64□□□□□ -0.71
Hoxa3P02831 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hoxa3P02831 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC10.64□□□□□ -0.71
Hoxa3P02831 Gm12241-201ENSMUST00000118330 726 ntBASIC10.64□□□□□ -0.71
Hoxa3P02831 Gm13297-201ENSMUST00000120205 934 ntBASIC10.64□□□□□ -0.71
Hoxa3P02831 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC10.64□□□□□ -0.71
Hoxa3P02831 Gm13316-201ENSMUST00000140537 691 ntBASIC10.64□□□□□ -0.71
Hoxa3P02831 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Hoxa3P02831 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Hoxa3P02831 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hoxa3P02831 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC10.64□□□□□ -0.71
Hoxa3P02831 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Hoxa3P02831 Gm38241-201ENSMUST00000192641 898 ntBASIC10.64□□□□□ -0.71
Hoxa3P02831 Gm38341-201ENSMUST00000195357 515 ntBASIC10.64□□□□□ -0.71
Hoxa3P02831 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC10.64□□□□□ -0.71
Hoxa3P02831 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC10.64□□□□□ -0.71
Hoxa3P02831 AC069562.3-201ENSMUST00000225387 587 ntBASIC10.64□□□□□ -0.71
Hoxa3P02831 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC10.64□□□□□ -0.71
Hoxa3P02831 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hoxa3P02831 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Hoxa3P02831 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hoxa3P02831 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hoxa3P02831 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Hoxa3P02831 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Hoxa3P02831 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hoxa3P02831 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hoxa3P02831 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hoxa3P02831 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Hoxa3P02831 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hoxa3P02831 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hoxa3P02831 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hoxa3P02831 Pck2-205ENSMUST00000226352 2784 ntBASIC10.64□□□□□ -0.71
Hoxa3P02831 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms