Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC10.94□□□□□ -0.66
Igh-VJ558P01758 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Igh-VJ558P01758 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igh-VJ558P01758 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Igh-VJ558P01758 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Igh-VJ558P01758 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igh-VJ558P01758 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.94□□□□□ -0.66
Igh-VJ558P01758 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Igh-VJ558P01758 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Igh-VJ558P01758 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igh-VJ558P01758 Gm43579-201ENSMUST00000202387 1307 ntBASIC10.94□□□□□ -0.66
Igh-VJ558P01758 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Igh-VJ558P01758 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igh-VJ558P01758 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Igh-VJ558P01758 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC10.94□□□□□ -0.66
Igh-VJ558P01758 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Igh-VJ558P01758 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Igh-VJ558P01758 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC10.94□□□□□ -0.66
Igh-VJ558P01758 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Igh-VJ558P01758 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Igh-VJ558P01758 Rmrp-201ENSMUST00000157463 271 ntBASIC10.94□□□□□ -0.66
Igh-VJ558P01758 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igh-VJ558P01758 Gm6222-202ENSMUST00000182143 629 ntBASIC10.94□□□□□ -0.66
Igh-VJ558P01758 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Igh-VJ558P01758 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC10.94□□□□□ -0.66
Igh-VJ558P01758 Gm37748-201ENSMUST00000194379 1140 ntBASIC10.94□□□□□ -0.66
Igh-VJ558P01758 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.94□□□□□ -0.66
Igh-VJ558P01758 Gm18584-201ENSMUST00000203098 964 ntBASIC10.94□□□□□ -0.66
Igh-VJ558P01758 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC10.94□□□□□ -0.66
Igh-VJ558P01758 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC10.94□□□□□ -0.66
Igh-VJ558P01758 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC10.94□□□□□ -0.66
Igh-VJ558P01758 Gm4935-201ENSMUST00000221316 1198 ntBASIC10.94□□□□□ -0.66
Igh-VJ558P01758 AL732506.1-201ENSMUST00000226420 281 ntBASIC10.94□□□□□ -0.66
Igh-VJ558P01758 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igh-VJ558P01758 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igh-VJ558P01758 Snora73a-201ENSMUST00000082453 205 ntBASIC10.94□□□□□ -0.66
Igh-VJ558P01758 n-R5s195-201ENSMUST00000082891 119 ntBASIC10.94□□□□□ -0.66
Igh-VJ558P01758 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igh-VJ558P01758 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Igh-VJ558P01758 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igh-VJ558P01758 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igh-VJ558P01758 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igh-VJ558P01758 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igh-VJ558P01758 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igh-VJ558P01758 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igh-VJ558P01758 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igh-VJ558P01758 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC10.94□□□□□ -0.66
Igh-VJ558P01758 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igh-VJ558P01758 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Igh-VJ558P01758 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igh-VJ558P01758 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igh-VJ558P01758 Daam2-202ENSMUST00000224595 1926 ntBASIC10.94□□□□□ -0.66
Igh-VJ558P01758 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Igh-VJ558P01758 Gm7789-202ENSMUST00000211273 1400 ntBASIC10.93□□□□□ -0.66
Igh-VJ558P01758 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Igh-VJ558P01758 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Igh-VJ558P01758 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Igh-VJ558P01758 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Igh-VJ558P01758 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Igh-VJ558P01758 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.93□□□□□ -0.66
Igh-VJ558P01758 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Igh-VJ558P01758 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Igh-VJ558P01758 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Igh-VJ558P01758 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Igh-VJ558P01758 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Igh-VJ558P01758 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC10.93□□□□□ -0.66
Igh-VJ558P01758 Gm2639-201ENSMUST00000156881 1297 ntBASIC10.93□□□□□ -0.66
Igh-VJ558P01758 Gm8835-201ENSMUST00000173096 1169 ntBASIC10.93□□□□□ -0.66
Igh-VJ558P01758 Gm25927-201ENSMUST00000175058 117 ntBASIC10.93□□□□□ -0.66
Igh-VJ558P01758 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Igh-VJ558P01758 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Igh-VJ558P01758 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Igh-VJ558P01758 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC10.93□□□□□ -0.66
Igh-VJ558P01758 AC130829.1-201ENSMUST00000221548 494 ntBASIC10.93□□□□□ -0.66
Igh-VJ558P01758 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Igh-VJ558P01758 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Igh-VJ558P01758 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Igh-VJ558P01758 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Igh-VJ558P01758 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Igh-VJ558P01758 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Igh-VJ558P01758 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Igh-VJ558P01758 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Igh-VJ558P01758 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC10.93□□□□□ -0.66
Igh-VJ558P01758 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Igh-VJ558P01758 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Igh-VJ558P01758 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Igh-VJ558P01758 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Igh-VJ558P01758 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC10.93□□□□□ -0.66
Igh-VJ558P01758 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Igh-VJ558P01758 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Igh-VJ558P01758 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Igh-VJ558P01758 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Igh-VJ558P01758 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Igh-VJ558P01758 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC10.92□□□□□ -0.66
Igh-VJ558P01758 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Igh-VJ558P01758 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Igh-VJ558P01758 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Igh-VJ558P01758 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Igh-VJ558P01758 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Igh-VJ558P01758 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms