Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Syn1O88935 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Syn1O88935 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Syn1O88935 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Syn1O88935 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Syn1O88935 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Syn1O88935 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Syn1O88935 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Syn1O88935 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Syn1O88935 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Syn1O88935 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Syn1O88935 Gm12015-201ENSMUST00000117065 843 ntBASIC13.06□□□□□ -0.32
Syn1O88935 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Syn1O88935 Rmrp-201ENSMUST00000157463 271 ntBASIC13.06□□□□□ -0.32
Syn1O88935 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC13.06□□□□□ -0.32
Syn1O88935 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC13.06□□□□□ -0.32
Syn1O88935 Gm37028-201ENSMUST00000194276 107 ntBASIC13.06□□□□□ -0.32
Syn1O88935 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.06□□□□□ -0.32
Syn1O88935 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.06□□□□□ -0.32
Syn1O88935 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.06□□□□□ -0.32
Syn1O88935 CT485607.1-201ENSMUST00000216100 85 ntBASIC13.06□□□□□ -0.32
Syn1O88935 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.06□□□□□ -0.32
Syn1O88935 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.06□□□□□ -0.32
Syn1O88935 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Syn1O88935 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Syn1O88935 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Syn1O88935 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Syn1O88935 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Syn1O88935 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Syn1O88935 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Syn1O88935 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.06□□□□□ -0.32
Syn1O88935 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Syn1O88935 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC13.06□□□□□ -0.32
Syn1O88935 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Syn1O88935 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Syn1O88935 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Syn1O88935 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Syn1O88935 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Syn1O88935 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Syn1O88935 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Syn1O88935 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Syn1O88935 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Syn1O88935 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Syn1O88935 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Syn1O88935 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Syn1O88935 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Syn1O88935 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Syn1O88935 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Syn1O88935 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Syn1O88935 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Syn1O88935 Gm14999-201ENSMUST00000121039 624 ntBASIC13.05□□□□□ -0.32
Syn1O88935 Gm14832-201ENSMUST00000121289 322 ntBASIC13.05□□□□□ -0.32
Syn1O88935 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC13.05□□□□□ -0.32
Syn1O88935 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC13.05□□□□□ -0.32
Syn1O88935 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC13.05□□□□□ -0.32
Syn1O88935 Gm9132-201ENSMUST00000210182 832 ntBASIC13.05□□□□□ -0.32
Syn1O88935 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.05□□□□□ -0.32
Syn1O88935 AC159376.1-201ENSMUST00000218504 630 ntBASIC13.05□□□□□ -0.32
Syn1O88935 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC13.05□□□□□ -0.32
Syn1O88935 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.05□□□□□ -0.32
Syn1O88935 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.05□□□□□ -0.32
Syn1O88935 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Syn1O88935 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Syn1O88935 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Syn1O88935 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Syn1O88935 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Syn1O88935 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Syn1O88935 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.05□□□□□ -0.32
Syn1O88935 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.05□□□□□ -0.32
Syn1O88935 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Syn1O88935 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Syn1O88935 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Syn1O88935 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Syn1O88935 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Syn1O88935 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Syn1O88935 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Syn1O88935 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Syn1O88935 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Syn1O88935 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Syn1O88935 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Syn1O88935 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Syn1O88935 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Syn1O88935 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Syn1O88935 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Syn1O88935 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Syn1O88935 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC13.04□□□□□ -0.32
Syn1O88935 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Syn1O88935 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Syn1O88935 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC13.04□□□□□ -0.32
Syn1O88935 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC13.04□□□□□ -0.32
Syn1O88935 Gm23363-201ENSMUST00000175024 79 ntBASIC13.04□□□□□ -0.32
Syn1O88935 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Syn1O88935 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC13.04□□□□□ -0.32
Syn1O88935 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Syn1O88935 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Syn1O88935 Gm21027-201ENSMUST00000219300 1236 ntBASIC13.04□□□□□ -0.32
Syn1O88935 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC13.04□□□□□ -0.32
Syn1O88935 AC154184.3-201ENSMUST00000225620 1090 ntBASIC13.04□□□□□ -0.32
Syn1O88935 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Syn1O88935 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms