Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hcn1O88704 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hcn1O88704 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hcn1O88704 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hcn1O88704 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hcn1O88704 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hcn1O88704 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hcn1O88704 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.17□□□□□ -0.46
Hcn1O88704 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hcn1O88704 Gm13226-201ENSMUST00000117838 404 ntBASIC12.17□□□□□ -0.46
Hcn1O88704 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.17□□□□□ -0.46
Hcn1O88704 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hcn1O88704 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hcn1O88704 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hcn1O88704 Gm37922-201ENSMUST00000195596 455 ntBASIC12.17□□□□□ -0.46
Hcn1O88704 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.17□□□□□ -0.46
Hcn1O88704 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.17□□□□□ -0.46
Hcn1O88704 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.17□□□□□ -0.46
Hcn1O88704 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.17□□□□□ -0.46
Hcn1O88704 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hcn1O88704 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hcn1O88704 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hcn1O88704 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.17□□□□□ -0.46
Hcn1O88704 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.17□□□□□ -0.46
Hcn1O88704 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hcn1O88704 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Hcn1O88704 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hcn1O88704 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hcn1O88704 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hcn1O88704 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hcn1O88704 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hcn1O88704 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.17□□□□□ -0.46
Hcn1O88704 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hcn1O88704 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hcn1O88704 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hcn1O88704 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Hcn1O88704 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hcn1O88704 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hcn1O88704 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Hcn1O88704 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.16□□□□□ -0.46
Hcn1O88704 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Hcn1O88704 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hcn1O88704 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hcn1O88704 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hcn1O88704 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Hcn1O88704 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hcn1O88704 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.16□□□□□ -0.46
Hcn1O88704 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hcn1O88704 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hcn1O88704 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Hcn1O88704 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.16□□□□□ -0.46
Hcn1O88704 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hcn1O88704 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.16□□□□□ -0.46
Hcn1O88704 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.16□□□□□ -0.46
Hcn1O88704 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hcn1O88704 Mir7085-201ENSMUST00000184353 66 ntBASIC12.16□□□□□ -0.46
Hcn1O88704 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Hcn1O88704 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.16□□□□□ -0.46
Hcn1O88704 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hcn1O88704 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.16□□□□□ -0.46
Hcn1O88704 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.16□□□□□ -0.46
Hcn1O88704 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.16□□□□□ -0.46
Hcn1O88704 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hcn1O88704 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hcn1O88704 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hcn1O88704 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hcn1O88704 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hcn1O88704 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hcn1O88704 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hcn1O88704 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hcn1O88704 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hcn1O88704 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hcn1O88704 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.16□□□□□ -0.46
Hcn1O88704 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hcn1O88704 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hcn1O88704 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hcn1O88704 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hcn1O88704 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hcn1O88704 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Hcn1O88704 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hcn1O88704 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hcn1O88704 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hcn1O88704 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hcn1O88704 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hcn1O88704 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Hcn1O88704 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hcn1O88704 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hcn1O88704 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hcn1O88704 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hcn1O88704 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hcn1O88704 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hcn1O88704 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hcn1O88704 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hcn1O88704 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hcn1O88704 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hcn1O88704 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Hcn1O88704 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hcn1O88704 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.15□□□□□ -0.46
Hcn1O88704 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.15□□□□□ -0.46
Hcn1O88704 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms