Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC13.2□□□□□ -0.3
Ttc3O88196 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ttc3O88196 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC13.2□□□□□ -0.3
Ttc3O88196 Gm43947-201ENSMUST00000203019 959 ntBASIC13.2□□□□□ -0.3
Ttc3O88196 Gm7848-201ENSMUST00000210739 718 ntBASIC13.2□□□□□ -0.3
Ttc3O88196 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC13.2□□□□□ -0.3
Ttc3O88196 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ttc3O88196 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Ttc3O88196 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ttc3O88196 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ttc3O88196 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ttc3O88196 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ttc3O88196 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ttc3O88196 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ttc3O88196 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.2□□□□□ -0.3
Ttc3O88196 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ttc3O88196 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ttc3O88196 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ttc3O88196 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.2□□□□□ -0.3
Ttc3O88196 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ttc3O88196 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ttc3O88196 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ttc3O88196 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ttc3O88196 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ttc3O88196 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ttc3O88196 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC13.2□□□□□ -0.3
Ttc3O88196 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.19□□□□□ -0.3
Ttc3O88196 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ttc3O88196 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ttc3O88196 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ttc3O88196 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ttc3O88196 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ttc3O88196 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ttc3O88196 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ttc3O88196 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ttc3O88196 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ttc3O88196 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ttc3O88196 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ttc3O88196 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.19□□□□□ -0.3
Ttc3O88196 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ttc3O88196 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Ttc3O88196 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC13.19□□□□□ -0.3
Ttc3O88196 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC13.19□□□□□ -0.3
Ttc3O88196 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13.19□□□□□ -0.3
Ttc3O88196 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ttc3O88196 Mir6979-201ENSMUST00000183927 56 ntBASIC13.19□□□□□ -0.3
Ttc3O88196 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ttc3O88196 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC13.19□□□□□ -0.3
Ttc3O88196 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ttc3O88196 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ttc3O88196 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ttc3O88196 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ttc3O88196 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ttc3O88196 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ttc3O88196 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ttc3O88196 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ttc3O88196 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ttc3O88196 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ttc3O88196 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ttc3O88196 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ttc3O88196 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC13.18□□□□□ -0.3
Ttc3O88196 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC13.18□□□□□ -0.3
Ttc3O88196 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC13.18□□□□□ -0.3
Ttc3O88196 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC13.18□□□□□ -0.3
Ttc3O88196 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC13.18□□□□□ -0.3
Ttc3O88196 Gm27552-201ENSMUST00000183351 62 ntBASIC13.18□□□□□ -0.3
Ttc3O88196 Gm27844-201ENSMUST00000183613 62 ntBASIC13.18□□□□□ -0.3
Ttc3O88196 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC13.18□□□□□ -0.3
Ttc3O88196 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC13.18□□□□□ -0.3
Ttc3O88196 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC13.18□□□□□ -0.3
Ttc3O88196 Gm9555-201ENSMUST00000200908 583 ntBASIC13.18□□□□□ -0.3
Ttc3O88196 Gm17827-201ENSMUST00000211825 742 ntBASIC13.18□□□□□ -0.3
Ttc3O88196 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ttc3O88196 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ttc3O88196 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ttc3O88196 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ttc3O88196 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ttc3O88196 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ttc3O88196 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ttc3O88196 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ttc3O88196 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ttc3O88196 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ttc3O88196 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ttc3O88196 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ttc3O88196 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ttc3O88196 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ttc3O88196 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC13.18□□□□□ -0.3
Ttc3O88196 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ttc3O88196 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.18□□□□□ -0.3
Ttc3O88196 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.18□□□□□ -0.3
Ttc3O88196 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC13.18□□□□□ -0.3
Ttc3O88196 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ttc3O88196 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ttc3O88196 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ttc3O88196 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Ttc3O88196 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ttc3O88196 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ttc3O88196 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ttc3O88196 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ttc3O88196 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms