Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ubr1O70481 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ubr1O70481 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ubr1O70481 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ubr1O70481 AC148324.1-201ENSMUST00000219034 4240 ntBASIC16.13■□□□□ 0.17
Ubr1O70481 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ubr1O70481 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ubr1O70481 Gm6905-201ENSMUST00000205729 511 ntBASIC16.13■□□□□ 0.17
Ubr1O70481 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ubr1O70481 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ubr1O70481 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ubr1O70481 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ubr1O70481 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ubr1O70481 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ubr1O70481 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ubr1O70481 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ubr1O70481 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC16.13■□□□□ 0.17
Ubr1O70481 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ubr1O70481 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ubr1O70481 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ubr1O70481 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC16.13■□□□□ 0.17
Ubr1O70481 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ubr1O70481 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ubr1O70481 Gm22711-201ENSMUST00000116890 133 ntBASIC16.13■□□□□ 0.17
Ubr1O70481 Gm4034-201ENSMUST00000187674 480 ntBASIC16.13■□□□□ 0.17
Ubr1O70481 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC16.13■□□□□ 0.17
Ubr1O70481 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ubr1O70481 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ubr1O70481 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ubr1O70481 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ubr1O70481 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ubr1O70481 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ubr1O70481 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ubr1O70481 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Ubr1O70481 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ubr1O70481 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ubr1O70481 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ubr1O70481 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ubr1O70481 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ubr1O70481 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ubr1O70481 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ubr1O70481 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ubr1O70481 Gm8731-201ENSMUST00000118088 412 ntBASIC16.12■□□□□ 0.17
Ubr1O70481 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Ubr1O70481 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Ubr1O70481 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ubr1O70481 Mir8115-201ENSMUST00000184992 119 ntBASIC16.12■□□□□ 0.17
Ubr1O70481 Gm38117-201ENSMUST00000194653 939 ntBASIC16.12■□□□□ 0.17
Ubr1O70481 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC16.12■□□□□ 0.17
Ubr1O70481 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ubr1O70481 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ubr1O70481 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ubr1O70481 Gm9387-201ENSMUST00000098624 1320 ntBASIC16.12■□□□□ 0.17
Ubr1O70481 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ubr1O70481 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Ubr1O70481 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ubr1O70481 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ubr1O70481 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ubr1O70481 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ubr1O70481 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC16.11■□□□□ 0.17
Ubr1O70481 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ubr1O70481 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ubr1O70481 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ubr1O70481 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ubr1O70481 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ubr1O70481 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Ubr1O70481 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
Ubr1O70481 Gm13263-201ENSMUST00000121271 838 ntBASIC16.11■□□□□ 0.17
Ubr1O70481 Gm6485-201ENSMUST00000160676 439 ntBASIC16.11■□□□□ 0.17
Ubr1O70481 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Ubr1O70481 Gm4310-201ENSMUST00000177847 889 ntBASIC16.11■□□□□ 0.17
Ubr1O70481 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ubr1O70481 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ubr1O70481 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ubr1O70481 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ubr1O70481 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ubr1O70481 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC16.11■□□□□ 0.17
Ubr1O70481 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ubr1O70481 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ubr1O70481 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ubr1O70481 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Ubr1O70481 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Ubr1O70481 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ubr1O70481 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ubr1O70481 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ubr1O70481 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ubr1O70481 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ubr1O70481 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ubr1O70481 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ubr1O70481 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ubr1O70481 Gm44942-201ENSMUST00000096093 2072 ntBASIC16.11■□□□□ 0.17
Ubr1O70481 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ubr1O70481 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Ubr1O70481 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC16.1■□□□□ 0.17
Ubr1O70481 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ubr1O70481 AC166344.1-201ENSMUST00000223745 674 ntBASIC16.1■□□□□ 0.17
Ubr1O70481 AC121960.1-201ENSMUST00000227982 564 ntBASIC16.1■□□□□ 0.17
Ubr1O70481 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ubr1O70481 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ubr1O70481 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms